Information on SUBCLASS 2.4.5 |
Subclass Accession number: 7799
Subclass: 2.4.5 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 25.5 +/- 22.1 Average RMSD (Å) : 0.387 +/- 0.259 Consensus geometry
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Consensus Sequence: | XGXXXX |
(φψ)-conformation: | aellbb |
Pattern: | x | x | [g] | [egknqs] | [GQS] | [aiktv] | [fitvw] |
Conservation: | -0.998 | -0.200 | 1.783 | -0.531 | 0.982 | -0.555 | -0.480 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a6j_A_64 | 1a6j | A | 64 | 70 | GIGNGIA | EEETTEE | xaelvbb |
1aj6_*_127 | 1aj6 | - | 134 | 140 | IQHEGKI | EEETTEE | bbevvbb |
1c0t_B_326 | 1c0t | B | 331 | 337 | KQGQGQW | EEETTEE | xaelvbb |
1h8e_D_46 | 1h8e | D | 52 | 58 | HLGESTV | EEETTEE | baellbb |
1i1n_A_50 | 1i1n | A | 51 | 57 | SIGFQAT | EEETTEE | xaelvbb |
1i7p_A_148 | 1i7p | A | 150 | 156 | YQGKGKF | EEETTEE | xaelvxb |
1kol_A_3 | 1kol | A | 8 | 14 | YLGSGKV | EEETTEE | xaelvbb |
1r18_A_51 | 1r18 | A | 52 | 58 | PIGGGVT | EEETTEE | xaelvbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1n_A_50 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 52 |
1i1n_A_50 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 54 |
1i1n_A_50 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Q - 55 |
1i1n_A_50 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | A - 56 |
1i1n_A_50 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 57 |
1i1n_A_50 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 58 |
1r18_A_51 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 53 |
1r18_A_51 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 55 |
1r18_A_51 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 57 |
1r18_A_51 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 58 |
1r18_A_51 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 59 |
Clusters included in this Subclass |
CLUSTER: HA.1.22 |