Information on SUBCLASS 2.4.8 |
Subclass Accession number: 7802
Subclass: 2.4.8 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 40.7 +/- 21.9 Average RMSD (Å) : 0.500 +/- 0.141 Consensus geometry
|
Consensus Sequence: | pppXXX |
(φψ)-conformation: | bbllbp |
Pattern: | x | [AV] | [AS] | [IV] | [QSY] | x | x | [GS] | x | x | x | [C] | [G] | [G] | [SV] | [L] | [ILV] | [ADN] |
Conservation: | -0.586 | -0.299 | -0.015 | 0.379 | -0.647 | -0.848 | -0.631 | 0.177 | -0.794 | -0.711 | -1.065 | 2.739 | 1.435 | 1.435 | -0.584 | 0.565 | 0.006 | -0.556 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bio_*_30 | 1bio | - | 30 | 47 | MASVQLNGAHLCGGVLVA | EEEEEETTEEEEEEEEEE | xbbxbblvbpabxbbxab |
1mza_A_30 | 1mza | A | 30 | 47 | MASIQYGGHHVCGGVLID | EEEEEETTEEEEEEEEEE | xbbxbbvvbxabxebxab |
1pq7_A_30 | 1pq7 | A | 30 | 47 | IVSISRNGGPWCGGSLLN | EEEEEETTEEEEEEEEEE | xbxbxblvbxNaebbxab |
2pka_A_30 | 2pka | A | 30 | 47 | QVAIYHYSSFQCGGVLVN | EEEEEETTEEEEEEEEEE | xxbbbblvbxabbbbxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pq7_A_30 | 1pq7 | A | ARGARGININE | W - 40 |
1pq7_A_30 | 1pq7 | A | ARGARGININE | C - 41 |
Clusters included in this Subclass |
CLUSTER: HA.3.43 |