Information on SUBCLASS 2.4.14 |
Subclass Accession number: 7808
Subclass: 2.4.14 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 5.3 +/- 7.7 Average RMSD (Å) : 0.867 +/- 0.153 Consensus geometry
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Consensus Sequence: | pXXXXX |
(φψ)-conformation: | bbllbp |
Pattern: | [FIV] | [FTY] | [ETW] | [RSW] | [HV] | x | [ST] | x | [GNS] | [EGN] | x | x | x | [AMV] | x | [QTW] | [LTV] | x | [DY] |
Conservation: | 0.951 | 0.666 | -0.334 | -0.762 | 0.078 | -0.477 | 2.378 | -0.477 | 0.951 | 0.237 | -0.905 | -1.333 | -0.048 | 0.237 | -1.191 | -0.048 | 0.237 | -1.619 | 1.460 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ikt_A_32 | 1ikt | A | 33 | 51 | VFEWHITKGGNIGAKWTID | EEEEEEESSSSEEEEEEEE | bbbbbxbbgvxxabbbbbx |
1itv_A_166 | 1itv | A | 166 | 184 | FYWRVSSRSELNQVDQVGY | EEEEEE--TT--EEEEEEE | bbbxbbxblUbxbxabbbx |
1xva_A_200 | 1xva | A | 202 | 220 | ITTSVLTVNNKAHMVTLDY | EEEEEEESSSSEEEEEEEE | bxbbbbbbllbpabbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ikt_A_32 | 1ikt | A | OXNOXTOXYNOL-10 | W - 36 |
1ikt_A_32 | 1ikt | A | OXNOXTOXYNOL-10 | I - 50 |
1xva_A_200 | 1xva | A | SAMS-ADENOSYLMETHIONINE | K - 200 |
1xva_A_200 | 1xva | A | SAMS-ADENOSYLMETHIONINE | I - 202 |
1xva_A_200 | 1xva | A | SAMS-ADENOSYLMETHIONINE | L - 218 |
1xva_A_200 | 1xva | A | SAMS-ADENOSYLMETHIONINE | Y - 220 |
Clusters included in this Subclass |
CLUSTER: HA.5.120 |