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Information on SUBCLASS 2.4.17
Subclass Accession number: 7811
Subclass: 2.4.17 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.7 +/- 8.1
Average RMSD (Å) : 0.767 +/- 0.208

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XppGXX
(φψ)-conformation: bbllbb
Pattern: [KTV][IVY]xx[GLP][VWY][PRT]x[KQR][DNS][G][AQT][SWY]
Conservation:-0.4880.168-0.780-0.634-1.1450.241-0.415-0.5610.6060.3872.868-0.3420.095
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bdm_A_2841bdm   A284296VYSFPVTAKDGAYEEEEEEEEETTEExbxbwbbbblvbb
1phm_*_2471phm   -248260KVVSGYRVRNGQWEEEEEEEEETTEEabbbbbbbblvxb
1uca_A_321uca   A3244TIHGLWPQQSGTSEEEEEEEEETTEEbxabbbxbblvbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1phm_*_2471phm   *     AZIAZIDE ION R - 254
1phm_*_2471phm   *     GOLGLYCEROL R - 256
1uca_A_321uca   A     U2PPHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER I - 33
1uca_A_321uca   A     U2PPHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER H - 34
1uca_A_321uca   A     U2PPHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER W - 37

Clusters included in this Subclass
CLUSTER: HA.2.114