Information on SUBCLASS 2.5.2 |
Subclass Accession number: 7814
Subclass: 2.5.2 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 16.7 +/- 24.8 Average RMSD (Å) : 0.367 +/- 0.082 Consensus geometry
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Consensus Sequence: | hpphhh |
(φψ)-conformation: | bbpgeb |
Pattern: | x | [GILV] | x | [EKQT] | [AGW] | [GY] | [FKWY] | x |
Conservation: | -0.799 | -0.953 | -1.126 | 0.619 | 0.537 | 1.314 | 1.127 | -0.719 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cb8_A_497 | 1cb8 | A | 497 | 504 | VISTAGKT | EEETTEEE | bbbxvebx |
1i82_A_116 | 1i82 | A | 121 | 128 | KLIEGGYI | EEETTEEE | bxbxvebb |
1j58_A_58 | 1j58 | A | 58 | 65 | RLEKGGYA | EEETTEEE | xxbxgebb |
1l0w_A_350 | 1l0w | A | 353 | 360 | RVEEGGFS | EEETTEEE | xbbxvebb |
1m56_B_134 | 1m56 | B | 139 | 146 | TGYQWYWG | EEETTEEE | bxbpvebb |
2occ_B_95 | 2occ | B | 100 | 107 | MGHQWYWS | EEETTEEE | bxbxvebb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i82_A_116 | 1i82 | A | CACALCIUM ION | E - 130 |
1j58_A_58 | 1j58 | A | MSESELENOMETHIONINE | Y - 64 |
1j58_A_58 | 1j58 | A | MSESELENOMETHIONINE | A - 65 |
1m56_B_134 | 1m56 | B | CUCOPPER (II) ION | Y - 141 |
1m56_B_134 | 1m56 | B | CUCOPPER (II) ION | Q - 142 |
1m56_B_134 | 1m56 | B | CUCOPPER (II) ION | W - 143 |
1m56_B_134 | 1m56 | B | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | Y - 144 |
1m56_B_134 | 1m56 | B | CUCOPPER (II) ION | W - 145 |
2occ_B_95 | 2occ | B | CUCOPPER (II) ION | H - 102 |
2occ_B_95 | 2occ | B | CUCOPPER (II) ION | W - 104 |
2occ_B_95 | 2occ | B | CUCOPPER (II) ION | W - 106 |
Clusters included in this Subclass |
CLUSTER: HA.2.31 |