Information on SUBCLASS 2.8.1 |
Subclass Accession number: 7827
Subclass: 2.8.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 7.4 +/- 10.5 Average RMSD (Å) : 0.467 +/- 0.121 Consensus geometry
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Consensus Sequence: | XXXpXh |
(φψ)-conformation: | bbFabb |
Pattern: | x | [GIKLTV] | [hvy] | [glt] | [eht] | x | [aclp] | [fkv] | x |
Conservation: | -0.425 | -1.077 | 1.792 | 0.468 | 1.207 | -1.149 | -0.659 | -0.022 | -0.135 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bob_*_18 | 1bob | - | 22 | 30 | SIVGENAVQ | EEESSSEEE | bbbFabxbx |
1bu6_O_260 | 1bu6 | O | 263 | 271 | NTYGTGCFM | EEESSSEEE | bbbFabbbx |
1bu7_A_433 | 1bu7 | A | 433 | 441 | IKETLTLKP | EEESSSEEE | xxbFabbbx |
1j2p_A_134 | 1j2p | A | 139 | 147 | AGVNEVPKL | EEESSSEEE | bebFabxbb |
1k6w_A_412 | 1k6w | A | 413 | 421 | TVYLEQPEA | EEESSSEEE | bbbFabxbx |
1mo9_A_389 | 1mo9 | A | 390 | 398 | FLHTHYEVS | EEESSSEEE | bbbFabxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bu6_O_260 | 1bu6 | O | GOLGLYCEROL | T - 267 |
1bu6_O_260 | 1bu6 | O | GOLGLYCEROL | G - 268 |
1bu6_O_260 | 1bu6 | O | GOLGLYCEROL | F - 270 |
1bu7_A_433 | 1bu7 | A | EDO1,2-ETHANEDIOL | E - 435 |
1bu7_A_433 | 1bu7 | A | EDO1,2-ETHANEDIOL | T - 436 |
1bu7_A_433 | 1bu7 | A | EDO1,2-ETHANEDIOL | L - 437 |
1bu7_A_433 | 1bu7 | A | EDO1,2-ETHANEDIOL | T - 438 |
1bu7_A_433 | 1bu7 | A | EDO1,2-ETHANEDIOL | L - 439 |
1mo9_A_389 | 1mo9 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 390 |
1mo9_A_389 | 1mo9 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 392 |
Clusters included in this Subclass |
CLUSTER: HA.2.36 |