Information on SUBCLASS 6.18.1 |
Subclass Accession number: 783
Subclass: 6.18.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.18 GO : GO:0004553 (>75 %) GO:0016798 (>75 %) GO:0016997 (>75 %) SCOP : 50938 (>75 %) 50939 (>75 %) 50940 (>75 %) 51350 (>75 %) 51430 (>75 %) 51431 (>75 %) 82783 (>75 %) 82784 (>75 %) 82785 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 22.7 +/- 23.3 Average RMSD (Å) : 0.700 +/- 0.424 Consensus geometry
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Consensus Sequence: | hphhppphXX |
(φψ)-conformation: | bppeapapbb |
Pattern: | x | x | [EKNR] | [GL] | [AG] | [DKS] | [ST] | [DGS] | [LW] | x | x |
Conservation: | -1.000 | -1.304 | 0.112 | -0.864 | 1.738 | -0.109 | 1.278 | 0.188 | 0.542 | -1.176 | -0.404 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1exb_A_39 | 1exb | A | 39 | 49 | YRNLGKSGLRV | EEESTTSS-EE | bbxxeaxaxxb |
1pyf_A_4 | 1pyf | A | 4 | 13 | .AKLGKSDLQV | .EE-TTS--EE | .bxxeaxaxbb |
4bcl_*_10 | 4bcl | - | 18 | 28 | ILEGGSSSWGQ | EE--TT---EE | bxxbeaxaxbx |
4ubp_C_19 | 4ubp | C | 19 | 29 | EVRLADTDLWI | EEE-TTSS-EE | bbxxeaxaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | K - 5 |
1pyf_A_4 | 1pyf | A | MSESELENOMETHIONINE | L - 6 |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | L - 6 |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | G - 7 |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | K - 8 |
1pyf_A_4 | 1pyf | A | MSESELENOMETHIONINE | V - 13 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | A - 11 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | H - 12 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | S - 13 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | Y - 15 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | E - 16 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | I - 17 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | V - 29 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | K - 30 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | G - 31 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | R - 32 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | A - 33 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | V - 35 |
Clusters included in this Subclass |
CLUSTER: HA.5.138 |
CLUSTER: HA.6.98 |