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Information on SUBCLASS 3.2.6
Subclass Accession number: 7838
Subclass: 3.2.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 54.2 +/- 0.5
Average RMSD (Å) : 0.300 +/- 0.100

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pGpTTcX
(φψ)-conformation: bbaaaeb
Pattern: [A][IV][CKT][HKR][RS][G][RS][T][T][GK][TVY][HQT][CS][G][ST][IV][T][A][KLV][N][AV][T][AV][N]
Conservation:0.3620.094-1.315-0.632-0.8931.480-0.8970.9210.921-0.749-1.253-1.129-0.5191.480-0.2470.0910.9210.362-1.4401.480-0.7150.921-0.7211.480
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hpg_A_1351hpg   A135158AIKKSGSTTKVTSGTVTAVNVTVNEEEEEETTTEEEEEEEEEEEEEEExbbbbbaaaexbbbbxabbvxxbx
1qq4_A_991qq4   A99122AVCHSGRTTGYQCGTITAKNVTANEEEEEETTTEEEEEEEEEEEEEEExbbbbbaaaebbbbxbabblxbbb
1sgp_E_1351sgp   E135158AVTRRGSTTGTHSGSVTALNATVNEEEEEETTTEEEEEEEEEEEEEEExbbbbbaaaebbbebxabblxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qq4_A_991qq4   A     GOLGLYCEROL T - 107
1qq4_A_991qq4   A     GOLGLYCEROL G - 108
1qq4_A_991qq4   A     GOLGLYCEROL Y - 109
1qq4_A_991qq4   A     GOLGLYCEROL Q - 110
1qq4_A_991qq4   A     GOLGLYCEROL Y - 123

Clusters included in this Subclass
CLUSTER: HA.2.75