Information on SUBCLASS 3.5.1 |
Subclass Accession number: 7844
Subclass: 3.5.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 25.6 +/- 21.9 Average RMSD (Å) : 0.500 +/- 0.129 Consensus geometry
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Consensus Sequence: | XhXXXGX |
(φψ)-conformation: | bbpgaeb |
Pattern: | x | x | [filvy] | x | [GQRS] | x | [G] | x |
Conservation: | -0.592 | -0.542 | -0.055 | -0.439 | 0.461 | -0.433 | 2.296 | -0.696 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b7b_A_149 | 1b7b | A | 150 | 157 | KEDAGRGW | EEETTTEE | bxbpgaeb |
1clc_*_117 | 1clc | - | 121 | 128 | LAVPGVGK | EEETTTEE | bbbpvaeb |
1g19_A_257 | 1g19 | A | 262 | 269 | DILYGKGI | EEETTTEE | xbxpvaex |
1gkz_A_353 | 1gkz | A | 357 | 364 | QSLQGIGT | EEETTTEE | bxbpgaeb |
1gtr_A_515 | 1gtr | A | 516 | 523 | FQFEREGY | EEETTTEE | bxxpvaeb |
1gtt_A_407 | 1gtt | A | 410 | 417 | VEVEGVGR | EEETTTEE | bbbpvaeb |
1jp4_A_167 | 1jp4 | A | 170 | 177 | WGVLGLGA | EEETTTEE | bbbxvaeb |
1k0w_A_165 | 1k0w | A | 166 | 173 | VLVHSHGP | EEETTTEE | bbxpUaex |
1ko7_A_198 | 1ko7 | A | 199 | 206 | LEIRGLGI | EEETTTEE | bbbpgaex |
1lpb_B_2 | 1lpb | B | 3 | 10 | VCYERLGC | EEETTTEE | bbbxgaex |
1oan_A_171 | 1oan | A | 173 | 180 | AELTGYGT | EEETTTEE | bxxpgaeb |
1r3s_A_99 | 1r3s | A | 99 | 106 | TMVPGKGP | EEETTTEE | bbxplaew |
1rp1_*_2 | 1rp1 | - | 3 | 10 | VCYEQIGC | EEETTTEE | bbbpvaeb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gkz_A_353 | 1gkz | A | ADPADENOSINE-5'-DIPHOSPHATE | L - 356 |
1gkz_A_353 | 1gkz | A | ADPADENOSINE-5'-DIPHOSPHATE | G - 363 |
1gkz_A_353 | 1gkz | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 364 |
1gkz_A_353 | 1gkz | A | ADPADENOSINE-5'-DIPHOSPHATE | V - 366 |
1k0w_A_165 | 1k0w | A | ZNZINC ION | H - 171 |
1k0w_A_165 | 1k0w | A | ZNZINC ION | G - 172 |
1k0w_A_165 | 1k0w | A | ZNZINC ION | F - 174 |
1ko7_A_198 | 1ko7 | A | PO4PHOSPHATE ION | E - 200 |
1ko7_A_198 | 1ko7 | A | PO4PHOSPHATE ION | R - 202 |
1r3s_A_99 | 1r3s | A | 1CPCOPROPORPHYRIN I | M - 100 |
1r3s_A_99 | 1r3s | A | 1CPCOPROPORPHYRIN I | G - 105 |
1r3s_A_99 | 1r3s | A | 1CPCOPROPORPHYRIN I | P - 106 |
Clusters included in this Subclass |
CLUSTER: HA.2.19 |