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Information on SUBCLASS 3.6.1
Subclass Accession number: 7847
Subclass: 3.6.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 11.7 +/- 15.2
Average RMSD (Å) : 0.738 +/- 0.263

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhppXh
(φψ)-conformation: bbeaabb
Pattern: xxx[degr][deknrsty][DEHKNQRTY]x[acfgivy][cfiklmtv][afilvy]
Conservation:-1.064-0.718-0.5851.8240.3461.163-0.906-0.680-0.2970.917
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b1i_A_621b1i   A6372NPHRENLRISEEETTTEEEEbwbeaabbbx
1bag_*_3611bag   -364373NQRGSHGVVLEEETTTEEEEbbxeaabbbb
1bdg_*_1581bdg   -159168VQKGLTHATLEEETTTEEEExxbeaabbbx
1eg7_A_10331eg7   A10341043ELYGKYKAKIEESSSS-EEEbxbeaabbbb
1gxy_A_1961gxy   A202211RTQGYNEIFLEEETTTEEEEbxbeaabbbb
1h3f_A_4161h3f   A418427LQRGKDRFVREEETTTEEEEbbbeaabbbb
1hkx_A_4101hkx   A420429HLMGDESACIEE-SSSEEEEbxbeaabbbb
1hx0_A_4161hx0   A419428FGRGNRGFIVEEETTTEEEEbbbeaabbbb
1jae_*_3921jae   -395404FSRGSQGFVAEEETTTEEEEbbbeaabbbb
1k3b_A_571k3b   A6170TIIYNQGFEIEEETTTEEEEbxbeaabbbb
1kyq_A_1521kyq   A154163LEIGDRLQILEEETTTEEEEbbbeaabbbb
1nnj_A_581nnj   A6170FEIGDDFRLIEEETTTEEEExbbeaabbxx
1ohv_A_4371ohv   A437446GGCGDKSIRFEEETTTEEEEbbbeaaxbbb
1qci_A_731qci   A7887DPFETNKCRYEEETTTEEEEbwbeaaxbxb
1qh5_A_21qh5   A615LPALTDNYMYEEETTTEEEEbwbeaaxbbb
1ryp_G_671ryp   G6776QVVDRHIGCVEEETTTEEEEbbbeaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hkx_A_4101hkx   A     TBRHEXATANTALUM DODECABROMIDE L - 421
1hkx_A_4101hkx   A     TBRHEXATANTALUM DODECABROMIDE M - 422
1hkx_A_4101hkx   A     TBRHEXATANTALUM DODECABROMIDE G - 423
1hkx_A_4101hkx   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE D - 424
1hkx_A_4101hkx   A     TBRHEXATANTALUM DODECABROMIDE D - 424
1k3b_A_571k3b   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 64
1k3b_A_571k3b   A     NAGN-ACETYL-D-GLUCOSAMINE N - 65
1kyq_A_1521kyq   A     MSESELENOMETHIONINE D - 158
1kyq_A_1521kyq   A     MSESELENOMETHIONINE R - 159
1nnj_A_581nnj   A     CRYPROPANE-1,2,3-TRIOL Y - 58
1nnj_A_581nnj   A     CRYPROPANE-1,2,3-TRIOL H - 72
1qci_A_731qci   A     ADEADENINE V - 73
1qci_A_731qci   A     ADEADENINE M - 74
1qci_A_731qci   A     ADEADENINE G - 75
1qh5_A_21qh5   A     ZNZINC ION N - 12
1qh5_A_21qh5   A     GTTGLUTATHIONE N - 12
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hkx_A_4101hkx   A AC1DTT BINDING SITE FOR CHAIN AD - 424

Clusters included in this Subclass
CLUSTER: HA.4.16