Information on SUBCLASS 6.20.1 |
Subclass Accession number: 785
Subclass: 6.20.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>50 %) 2.7.1 (>50 %) 2.7.7 (>75 %) GO : GO:0004872 (>75 %) GO:0016301 (>50 %) GO:0016772 (>50 %) GO:0016773 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 5.0 +/- 7.3 Average RMSD (Å) : 1.467 +/- 0.379 Consensus geometry
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Consensus Sequence: | XXXXpXcpXX |
(φψ)-conformation: | bbpaabappb |
Pattern: | x | [GV] | x | x | x | x | x | [GNS] | [EGP] | [SY] | x | [KN] | [NRT] | x | x | [PRT] | x | x | [EFL] | [ALV] |
Conservation: | -0.423 | 0.043 | 0.043 | -0.267 | -0.267 | -0.889 | -1.200 | 1.286 | -0.267 | 2.151 | -0.734 | 2.507 | 0.665 | -1.200 | -0.267 | -0.112 | -0.267 | -0.112 | -1.044 | 0.354 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h10_A_6 | 1h10 | A | 9 | 28 | EGWLHKRGEYIKTWRPRYFL | EEEEEEE-SSS--EEEEEEE | bexbbbxpaaxaxxbwbxbb |
1n08_A_74 | 1n08 | A | 78 | 97 | MVMSVGWNPYYKNKLRSAEV | EEEEEEE-TT-SS--EEEEE | bbbbbbbxaabaxpbxbbbb |
1o57_A_170 | 1o57 | A | 170 | 189 | TVSINYVSGSSNRIQTMSLA | EEEEEEE-SS--SEEEEEEE | xbbbbbbxaabaxpbbbbbp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | K - 14 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 15 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | G - 16 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | E - 17 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | Y - 18 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | I - 19 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | K - 20 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 23 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 25 |
1n08_A_74 | 1n08 | A | ZNZINC ION | E - 96 |
1n08_A_74 | 1n08 | A | ADPADENOSINE-5'-DIPHOSPHATE | V - 97 |
1n08_A_74 | 1n08 | A | ADPADENOSINE-5'-DIPHOSPHATE | H - 98 |
1n08_A_74 | 1n08 | A | ADPADENOSINE-5'-DIPHOSPHATE | L - 99 |
1o57_A_170 | 1o57 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | S - 177 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h10_A_6 | 1h10 | A | ITSITS BINDING SITE FOR CHAIN A | G - 16 |
1h10_A_6 | 1h10 | A | ITSITS BINDING SITE FOR CHAIN A | E - 17 |
Clusters included in this Subclass |
CLUSTER: HA.7.78 |