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PDB code:

Information on SUBCLASS 4.3.1

Subclass Accession number: 7891 Subclass: 4.3.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 35 Average sequence ID (%) : 14.3 +/- 19.2 Average RMSD (Å) : 0.457 +/- 0.339 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a0j_A_40	1a0j	A	44	54	GSLISSTWVVS	EEESSSSEEEE	bbxabaabbbb
1a7t_A_11	1a7t	A	13	23	ITQLSDKVYTY	EEE-SSSEEEE	bbxabaabbbb
1a7t_A_5	1a7t	A	5	14	.VKISDDISIT	.EE-SSSEEEE	.bxabaabbbb
1a81_A_192	1a81	A	195	205	RARDNNGSYAL	EE-SSSS-EEE	bxxaxaaxbbb
1a81_E_192	1a81	E	195	205	RARDNNGSYAL	EE-SSSSEEEE	bxxaxaNbbbb
1agj_A_55	1agj	A	59	69	GVLIGKNTVLT	EEE-SSSEEEE	bbxabaabbbb
1az9_*_61	1az9	-	64	74	LIKSDDTHNHS	EEE-SSS-EEE	bbbabaabbbb
1azw_A_12	1azw	A	15	25	SLKVDDRHTLY	EEE-SSS-EEE	bbxabaabbxx
1bdf_A_13	1bdf	A	16	26	IEQVSSTHAKV	EEESSSSEEEE	bbxabaabbbx
1ble_*_115	1ble	-	115	123	.RQITKSVSV.	.EE-SSSBEE.	.bxabaabbb.
1bqy_A_39	1bqy	A	44	54	GTLINQDWVVT	EEE-SSSEEEE	bbxabaabbbb
1dle_A_40	1dle	A	44	54	GAVVSEYFVLT	EEE-SSSEEEE	bbxabaabbxb
1eax_A_39	1eax	A	44	54	ASLISPNWLVS	EEE-SSSEEEE	bbxabaabbbb
1eep_A_33	1eep	A	33	41	.TQLTKNISL.	.EESSSS-EE.	.bbabaabbb.
1ekb_B_39	1ekb	B	44	54	ASLVSRDWLVS	EEE-SSSEEEE	bbxabaabbbb
1f1s_A_736	1f1s	A	738	748	SVKLNDHFALA	EEESSSSEEEE	bbbabaabbbb
1g2l_A_40	1g2l	A	44	54	GTILSEFYILT	EEE-SSSEEEE	bbxabaabbbb
1gg6_B_40	1gg6	B	44	54	GSLINENWVVT	EEESSSSEEEE	bbxabaabbbb
1h8d_H_38	1h8d	H	44	54	ASLISDRWVLT	EEE-SSSEEEE	bbxabaabbbb
1hkv_A_318	1hkv	A	321	331	DVDVSATAHRR	EEE-SSS-EEE	xbxabaaxbbx
1j0h_A_15	1j0h	A	15	25	AYAYDSETLHL	EEESSSS-EEE	bbxabaabbbb
1j2p_A_67	1j2p	A	67	77	IYKIDEHICAA	EEE-SSSEEEE	bbxabaabbbb
1jg1_A_179	1jg1	A	188	198	PVGSYHLWQEL	EE-SSSS-EEE	wbbabaabbbx
1jr1_A_53	1jr1	A	53	61	.SALTKKITL.	.EESSSS-EE.	.bxabaaxbb.
1kdq_A_40	1kdq	A	44	54	GSLISEDWVVT	EEESSSSEEEE	bbxabaabbbb
1kig_H_40	1kig	H	44	54	GTILNEFYVLT	EEE-SSSEEEE	bbxabaabbbb
1kli_H_39	1kli	H	44	54	GTLINTIWVVS	EEE-SSSEEEE	bbxabaabbbb
1n6a_A_267	1n6a	A	267	276	.LSLDEETVID	.EE-SSS-EEE	.bxabaabbxb
1q5h_A_16	1q5h	A	16	25	.TRGSARAAGY	.EESSTT-SEE	.bbabaaxabx
1rie_*_185	1rie	-	185	195	YEFTSDDMVIV	EEESSSSEEEE	bbxabaabbbb
1ryp_A_72	1ryp	A	72	82	IFCISRTIGMV	EEE-SSS-EEE	bbxabaabbbb
1ryp_C_66	1ryp	C	66	76	LYKLNDKIAVA	EEESSSSEEEE	bbxabaabbbb
2sns_*_14	2sns	-	15	25	IKAIDGDTVKL	EEE-SSSEEEE	abxabaabbxb
3rp2_A_39	3rp2	A	44	54	GFLISRQFVLT	EEESSSSEEEE	ebxabaabbxb
4kbp_A_388	4kbp	A	392	402	FDIKNRTHAHF	EEE-SSSEEEE	bbxabaabbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1a7t_A_11	1a7t	A	MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID	I - 29
1a81_A_192	1a81	A	PTRO-PHOSPHOTYROSINE	R - 195
1a81_A_192	1a81	A	PTRO-PHOSPHOTYROSINE	R - 197
1a81_E_192	1a81	E	PTRO-PHOSPHOTYROSINE	Y - 203
1a81_A_192	1a81	A	PTRO-PHOSPHOTYROSINE	A - 204
1bqy_A_39	1bqy	A	ARMDEOXY-METHYL-ARGININE	L - 41
1bqy_A_39	1bqy	A	ARMDEOXY-METHYL-ARGININE	C - 42
1ekb_B_39	1ekb	B	CH2METHYLENE GROUP	V - 41
1ekb_B_39	1ekb	B	CH2METHYLENE GROUP	C - 42
1ekb_B_39	1ekb	B	ZNZINC ION	D - 50
1ekb_B_39	1ekb	B	ZNZINC ION	W - 51
1gg6_B_40	1gg6	B	APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE)	F - 41
1gg6_B_40	1gg6	B	APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE)	C - 42
1gg6_B_40	1gg6	B	EDO1,2-ETHANEDIOL	I - 47
1gg6_B_40	1gg6	B	EDO1,2-ETHANEDIOL	N - 48
1n6a_A_267	1n6a	A	MSESELENOMETHIONINE	L - 269
1n6a_A_267	1n6a	A	MSESELENOMETHIONINE	D - 270
1q5h_A_16	1q5h	A	DUDDEOXYURIDINE-5'-DIPHOSPHATE	D - 26
2sns_*_14	2sns	*	CACALCIUM ION	D - 19
2sns_*_14	2sns	*	PTPTHYMIDINE-3',5'-DIPHOSPHATE	D - 19
2sns_*_14	2sns	*	CACALCIUM ION	D - 21
2sns_*_14	2sns	*	PTPTHYMIDINE-3',5'-DIPHOSPHATE	D - 21
2sns_*_14	2sns	*	CACALCIUM ION	T - 22
2sns_*_14	2sns	*	PTPTHYMIDINE-3',5'-DIPHOSPHATE	T - 22
4kbp_A_388	4kbp	A	NAGN-ACETYL-D-GLUCOSAMINE	K - 395
4kbp_A_388	4kbp	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 396
4kbp_A_388	4kbp	A	NAGN-ACETYL-D-GLUCOSAMINE	T - 398
4kbp_A_388	4kbp	A	NAGN-ACETYL-D-GLUCOSAMINE	H - 399

Clusters included in this Subclass

CLUSTER: HA.3.22

CLUSTER: HA.4.13

CLUSTER: HA.5.46

CLUSTER: HA.5.6

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