Information on SUBCLASS 4.4.1 |
Subclass Accession number: 7893
Subclass: 4.4.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 31 Average sequence ID (%) : 17.1 +/- 18.3 Average RMSD (Å) : 0.506 +/- 0.246 Consensus geometry
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Consensus Sequence: | XpXpcXhX |
(φψ)-conformation: | bbaalppb |
Pattern: | x | x | [dgknqst] | [adegknrs] | [adegknrst] | [dgn] | x | [acilmpvy] | x |
Conservation: | -0.555 | -0.683 | 0.886 | -0.500 | 0.335 | 2.250 | -0.495 | -0.558 | -0.679 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_391 | 1a8d | - | 394 | 402 | LYDDKNASL | EE-SSS-EE | xbxaavxxa |
1ava_A_97 | 1ava | A | 97 | 105 | HKDGRGIYC | EE-TTS-EE | bxxaavxxa |
1c0d_A_12 | 1c0d | A | 13 | 21 | ILDANNVPV | EE-TTS-EE | bbxaalxwb |
1df7_A_143 | 1df7 | A | 143 | 151 | RFSRSGLRY | EE-TTS-EE | bbxaavxxb |
1dpj_A_238 | 1dpj | A | 238 | 246 | KKGWTGQYT | EE-TTSSEE | bxbaavbxb |
1e4e_A_286 | 1e4e | A | 294 | 302 | FLQDNGRIV | EE-TT--EE | bbxaavxxb |
1f8m_A_249 | 1f8m | A | 252 | 260 | ERTREGFYR | EE-TTS-EE | xbbaavxbx |
1fp3_A_361 | 1fp3 | A | 361 | 369 | YLNREGKVA | EE-TTS-EE | bbxaavxxa |
1fui_A_404 | 1fui | A | 404 | 412 | QRDSEGNPT | EE-TTS-EE | xbxaavxxb |
1gdo_A_219 | 1gdo | A | 221 | 229 | IFDKTGAEV | EE-TT--EE | bbxaavxxb |
1hiz_A_332 | 1hiz | A | 333 | 341 | YYDANGNVV | EE-TTS-EE | xbxaavbpb |
1hzt_A_35 | 1hzt | A | 39 | 47 | LFNAKGQLL | EE-TT--EE | bbxaavxxx |
1i2k_A_161 | 1i2k | A | 164 | 172 | VLDSEGWVT | EEBTTSBEE | bbxaavxpa |
1iw7_C_838 | 1iw7 | C | 839 | 847 | LANRHGNKG | EEETTS-EE | bbxaagxbb |
1j11_A_479 | 1j11 | A | 485 | 493 | IKSKDGTVK | EE-TTS-EE | xbxaavbxa |
1j7g_A_55 | 1j7g | A | 55 | 63 | FSDENDKMN | EE-TTS-EE | bxxaavxxa |
1j9q_A_162 | 1j9q | A | 162 | 170 | LHDGKGKAL | EE-TTS-EE | xbxaavxxb |
1jke_A_55 | 1jke | A | 55 | 63 | FSDAEGKMN | EE-TTS-EE | bxxaagbxa |
1k2y_X_248 | 1k2y | X | 250 | 258 | VVTNTGTII | EEETT--EE | bbxaavxxb |
1khb_A_383 | 1khb | A | 383 | 391 | ITSWKNKEW | EE-TTSSEE | bbxaavbxb |
1kxr_A_262 | 1kxr | A | 262 | 270 | AITFKNLVR | EE-TTS-EE | bxbaalbbx |
1lkt_A_65 | 1lkt | A | 66 | 74 | IINAAGKIV | EE-TTS-EE | bbxaavbxb |
1mdb_A_409 | 1mdb | A | 416 | 424 | RLTRDGYIV | EE-TTS-EE | bbxaavxbb |
1nif_*_162 | 1nif | - | 162 | 170 | LKDEKGQPL | EE-TTS-EE | xbxaavxxb |
1o6i_A_46 | 1o6i | A | 53 | 61 | DINSNLECA | EE-TTSSEE | bbxaavbxb |
1o7d_C_535 | 1o7d | C | 537 | 545 | VKDPGGKIV | EE-SSS-EE | bbxaagxxb |
1oac_A_585 | 1oac | A | 593 | 601 | KENRMGNPV | EE-TTS-EE | bbxaavbpx |
1p6w_A_98 | 1p6w | A | 98 | 106 | YKDSRGIYC | EE-TTS-EE | bxxaavbxN |
2blt_A_202 | 2blt | A | 202 | 209 | .GYRDGKAV | .EESSSSEE | .xbFavxxb |
2nap_A_250 | 2nap | A | 253 | 261 | FMDAEGKPS | EE-TTS-EE | bbxaavxpb |
2plc_*_80 | 2plc | - | 84 | 92 | RAKDNLNIY | EE-TTSEEE | bbbaavbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4e_A_286 | 1e4e | A | AC1PHY BINDING SITE FOR CHAIN A | R - 290 |
2plc_*_80 | 2plc | * | CICINOSITOL BINDING SITE. | H - 93 |
Clusters included in this Subclass |
CLUSTER: HA.4.15 |
CLUSTER: HA.5.13 |
CLUSTER: HA.5.36 |
CLUSTER: HA.6.56 |