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Information on SUBCLASS 6.25.1
Subclass Accession number: 790
Subclass: 6.25.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 82783 (>50 %)  82784 (>50 %)  82785 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 26.7 +/- 27.6
Average RMSD (Å) : 0.567 +/- 0.208

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpGXXpphph
(φψ)-conformation: bbepaaapbb
Pattern: [IW][ES][G][DGP]x[KNR][NQR][AG][KS][AG]
Conservation:0.329-0.0982.449-0.934-1.327-0.226-0.3830.145-0.0980.145
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f8e_A_1891f8e   A194203ISGPNNNASAEES-TTS-EEbbexaaaxbb
1nye_D_6271nye   D631640WEGDIKRGKGEES-TTT-EEbbepaaaxbb
1ukk_A_101ukk   A1019WEGGLRQGKGEES-TTT-EEbbexaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ukk_A_101ukk   A     MSESELENOMETHIONINE W - 10
1ukk_A_101ukk   A     MSESELENOMETHIONINE L - 14
1ukk_A_101ukk   A     MSESELENOMETHIONINE G - 19

Clusters included in this Subclass
CLUSTER: HA.6.131