Information on SUBCLASS 4.13.1 |
Subclass Accession number: 7906
Subclass: 4.13.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 55.6 +/- 19.1 Average RMSD (Å) : 0.250 +/- 0.058 Consensus geometry
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Consensus Sequence: | hpGQYGhc |
(φψ)-conformation: | pagplgbb |
Pattern: | [AR] | [V] | [LM] | [PT] | [CV] | [AG] | [AV] | x | [LM] | [DET] | [G] | [Q] | [Y] | [G] | [IL] | [DN] | [DGK] | [IT] | [FY] | [FIV] | [G] | [TV] | [P] | [AV] | [IK] | [IL] | [G] |
Conservation: | -0.750 | 0.301 | -0.120 | -0.202 | -0.453 | -0.547 | -0.755 | -1.386 | -0.123 | -0.720 | 1.363 | 0.832 | 1.894 | 1.363 | -0.227 | 0.043 | -1.231 | -0.906 | 0.725 | -0.759 | 1.363 | -0.625 | 1.894 | -0.702 | -1.434 | -0.201 | 1.363 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ez4_A_268 | 1ez4 | A | 268 | 294 | AVLPVGAYMDGQYGLNDIYIGTPAIIG | EEEEEEEEEESGGG-EEEEEEEEEEEE | xxbxbxbxxagpUvbblbxbxbwbxbb |
1gv0_A_245 | 1gv0 | A | 245 | 271 | RVLTCAVSLDGQYGIDGTFVGVPVKLG | EEEEEEEEEESGGG-EEEEEEEEEEEE | xbbxbxbxxagpvvbbgxxbxbwbxxb |
1gv1_A_245 | 1gv1 | A | 245 | 271 | RVLPCAVGLEGQYGIDKTFVGVPVKLG | EEEEEEEEEESGGG-EEEEEEEEEEEE | xxbxbxbxxagxvgxbvbxbxbwbxxb |
1ur5_A_246 | 1ur5 | A | 246 | 272 | RVMPVAAYLTGQYGLNDIYFGVPVILG | EEEEEEEEEESGGG-EEEEEEEEEEEE | xbbxbxbxxagxlvbblbbbxbwbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ur5_A_246 | 1ur5 | A | CDCADMIUM ION | R - 246 |
Clusters included in this Subclass |
CLUSTER: HA.4.86 |