Information on SUBCLASS 5.1.5 |
Subclass Accession number: 7923
Subclass: 5.1.5 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 19.8 +/- 20.3 Average RMSD (Å) : 0.650 +/- 0.321 Consensus geometry
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Consensus Sequence: | XXpXpGXXh |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | x | [DNT] | [adnrs] | [ADENS] | [GN] | x | x | x | x |
Conservation: | -0.745 | -0.586 | 0.909 | -0.355 | 0.662 | 2.283 | -0.398 | -0.707 | -0.161 | -0.903 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a88_A_2 | 1a88 | A | 3 | 12 | VTTSDGTNIF | EE-TTS-EEE | bxxaavxxbx |
1a8q_*_2 | 1a8q | - | 3 | 12 | CTTRDGVEIF | EE-TTS-EEE | bxxaavxxbx |
1eag_A_241 | 1eag | A | 243 | 252 | TQDSNGNSFY | EE-TTS-EEE | bbxaavxxbx |
1f8m_A_249 | 1f8m | A | 252 | 261 | ERTREGFYRT | EE-TTS-EEE | xbbaavxbxb |
1igw_A_253 | 1igw | A | 256 | 265 | ERTSEGFFRT | EE-TTS-EEE | xbxaavxbxb |
1k8t_A_475 | 1k8t | A | 478 | 487 | AKNVEGVLKP | EEESSSSEEE | bbxaagbxbx |
1ky9_A_213 | 1ky9 | A | 214 | 223 | LVNLNGELIG | EE-TTS-EEE | bbxaavxxae |
1p1j_A_114 | 1p1j | A | 118 | 127 | GIDAEGNDVY | EE-TTS-EEE | ebxaavbpbb |
1p7t_A_345 | 1p7t | A | 349 | 358 | IWDSEGNEIP | EE-TTS-EEE | bbxaavxxxx |
1pq7_A_198 | 1pq7 | A | 199 | 208 | IVDSSNTLIG | EE-TT--EEE | bbxaavxxab |
2ptd_*_65 | 2ptd | - | 71 | 80 | RLTDDNTIVL | EE-TTS-EEE | bxbaavbbbx |
3pvi_A_59 | 3pvi | A | 59 | 68 | AVDNAGQEYE | EE-TT--EEE | bbxaavxxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1igw_A_253 | 1igw | A | HGMERCURY (II) ION | S - 259 |
1igw_A_253 | 1igw | A | HGMERCURY (II) ION | E - 260 |
1igw_A_253 | 1igw | A | HGMERCURY (II) ION | G - 261 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | V - 215 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | N - 216 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | L - 217 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | N - 218 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | G - 219 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | E - 220 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | L - 221 |
1ky9_A_213 | 1ky9 | A | MSESELENOMETHIONINE | I - 222 |
1pq7_A_198 | 1pq7 | A | ARGARGININE | V - 210 |
1pq7_A_198 | 1pq7 | A | ARGARGININE | S - 211 |
1pq7_A_198 | 1pq7 | A | ARGARGININE | W - 212 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2ptd_*_65 | 2ptd | * | ACTACTIVE SITE. | H - 82 |
3pvi_A_59 | 3pvi | A | CA1CATALYTIC RESIDUES-FIRST MONOMER | E - 68 |
3pvi_A_59 | 3pvi | A | CA1CATALYTIC RESIDUES-FIRST MONOMER | K - 70 |
Clusters included in this Subclass |
CLUSTER: HA.5.30 |
CLUSTER: HA.6.34 |