Logo
Information on SUBCLASS 6.28.1
Subclass Accession number: 793
Subclass: 6.28.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004857 (>75 %)  GO:0004866 (>75 %)  GO:0004867 (>75 %)  GO:0030414 (>75 %)  
SCOP : 57015 (>75 %)  57247 (>75 %)  57248 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 9.5 +/- 13.9
Average RMSD (Å) : 1.033 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hXXXXcXhXX
(φψ)-conformation: bbabplbpbp
Pattern: [DHR][IL][IKL][CVY][AY][EGS]xxx[GN][DGT][FP]x[IKL]
Conservation:0.1211.996-0.631-0.0050.331-0.130-0.882-1.007-0.7562.162-0.3810.569-0.756-0.631
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ioo_A_1501ioo   A150163DIKCAEVTKGTPELEEEEE-SSTT--EEbxbbbbabpvbxbx
1oga_E_451oga   E4659RLIYYSQIVNDFQKEEEEEESSTT--EEbxabbbabpvbbbx
1p0h_A_481p0h   A4962HLLVAGSRPGGPIIEEEEE-SSTT--EEbbbbxxabpvbxxa

Clusters included in this Subclass
CLUSTER: HA.6.102