Information on SUBCLASS 5.3.1 |
Subclass Accession number: 7931
Subclass: 5.3.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 18.0 +/- 19.7 Average RMSD (Å) : 0.642 +/- 0.427 Consensus geometry
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Consensus Sequence: | ppXXpXXXh |
(φψ)-conformation: | bpaaalpbb |
Pattern: | x | x | [acdsv] | x | [adens] | x | x | [NST] | [DEGKNQRS] | x | x | x | [agv] | x | [CGKLV] |
Conservation: | -0.750 | -0.661 | -0.346 | -0.282 | 1.268 | -0.603 | -0.883 | 2.606 | 0.191 | -0.730 | -1.210 | -0.116 | 1.028 | 0.378 | 0.108 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a06_*_34 | 1a06 | - | 35 | 49 | ILAEDKRTQKLVAIK | EEEEETTT--EEEEE | xxbbxaaavxxbbbb |
1apm_E_55 | 1apm | E | 58 | 72 | MLVKHKESGNHYAMK | EEEEETTT--EEEEE | bxbbxaaavxxbbbx |
1cm8_A_41 | 1cm8 | A | 42 | 56 | CSAVDGRTGAKVAIK | EEEEETTT--EEEEE | bbbbxaaagxxbbbb |
1cpy_*_367 | 1cpy | - | 367 | 381 | RNWTASITDEVAGEV | EEEE-TTT-SEEEEE | bxbxxaaalbpabbx |
1dp4_A_376 | 1dp4 | A | 378 | 392 | LWDMDPETGAFRVVL | EEEE-TTT--EEEEE | bbbxxaaavxbbxab |
1h1w_A_95 | 1h1w | A | 97 | 111 | VLARELATSREYAIK | EEEEETTT--EEEEE | bxbbxaaavxbbxxx |
1h8d_H_198 | 1h8d | H | 199 | 213 | FVMKSPFNNRWYQMG | EEEE-TTT--EEEEE | bbbbpaaalbxbxab |
1ia8_A_22 | 1ia8 | A | 24 | 38 | QLAVNRVTEEAVAVK | EEEEETTT--EEEEE | bxbbxaaavxbbbbx |
1inp_*_196 | 1inp | - | 205 | 219 | FVSQDLHTRRWKGQC | EEEE-TTT--EEEEE | babbxaaaUxxbbbb |
1jks_A_25 | 1jks | A | 28 | 42 | KKCREKSTGLQYAAK | EEEEETTT--EEEEE | bxbbxaaavxxbbxb |
1mq4_A_146 | 1mq4 | A | 148 | 162 | YLAREKQSKFILALK | EEEEETTT--EEEEE | bxbbxaaavxxbbbx |
1pme_*_39 | 1pme | - | 40 | 54 | CSAYDNVNKVRVAIK | EEEEETTT-SEEEEE | bxbbxaaalbxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h1w_A_95 | 1h1w | A | AC7GOL BINDING SITE FOR CHAIN A | S - 105 |
1h1w_A_95 | 1h1w | A | AC5GOL BINDING SITE FOR CHAIN A | R - 106 |
1h1w_A_95 | 1h1w | A | AC5GOL BINDING SITE FOR CHAIN A | E - 107 |
1h1w_A_95 | 1h1w | A | AC5GOL BINDING SITE FOR CHAIN A | Y - 108 |
1h1w_A_95 | 1h1w | A | BC6ATP BINDING SITE FOR CHAIN A | A - 109 |
1h1w_A_95 | 1h1w | A | AC8GOL BINDING SITE FOR CHAIN A | K - 111 |
Clusters included in this Subclass |
CLUSTER: HA.6.12 |