Information on SUBCLASS 5.3.2 |
Subclass Accession number: 7932
Subclass: 5.3.2 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 16.7 +/- 18.2 Average RMSD (Å) : 0.300 +/- 0.095 Consensus geometry
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Consensus Sequence: | XcXXpXpXX |
(φψ)-conformation: | bbaaalpbb |
Pattern: | [AFITV] | x | [cdgn] | [afklt] | x | [cdnsty] | [egn] | [dknrt] | x | x |
Conservation: | 1.176 | -1.256 | 0.737 | -0.508 | -0.166 | -0.216 | 1.376 | 0.956 | -1.328 | -0.771 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cb8_A_667 | 1cb8 | A | 672 | 681 | IRDLKTGKTN | EEETTT--EE | bbxaaavxbx |
1d02_A_84 | 1d02 | A | 86 | 95 | IENTETHKIL | EEETTT--EE | bbxaaavxbb |
1ghp_A_43 | 1ghp | A | 48 | 57 | ALDTKSGKEV | EEETTT--EE | bbxaaavxbb |
1go3_E_127 | 1go3 | E | 127 | 136 | IIGKETGKVL | EEETTT--EE | xbxaaavxbb |
1k32_A_384 | 1k32 | A | 389 | 398 | IYDYRTGKAE | EEETTT--EE | bbxaaavxbb |
1lbv_A_112 | 1lbv | A | 117 | 126 | VYNLATGDEY | EEETTT--EE | bbxaaavxbb |
1lci_*_40 | 1lci | - | 42 | 51 | FTDAHIEVNI | EEETTT--EE | bbxaaavxbb |
1mfo_A_42 | 1mfo | A | 48 | 57 | AANLQSGRRI | EEETTT--EE | bbxaaavxbb |
1mk0_A_4 | 1mk0 | A | 8 | 17 | IKNTLNNKVY | EEETTT--EE | bbxaaavxbb |
1nui_A_34 | 1nui | A | 34 | 43 | TFCYVCEKWT | EEETTT--EE | bbbaaavbbb |
1pfq_A_75 | 1pfq | A | 78 | 87 | VFNAEYGNSS | EEETTT--EE | bbxaaavxbb |
1umw_A_530 | 1umw | A | 532 | 541 | INFFQDHTKL | EEETTT--EE | bbxaaavxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.5.26 |