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Information on SUBCLASS 5.5.1
Subclass Accession number: 7940
Subclass: 5.5.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 15.6 +/- 18.6
Average RMSD (Å) : 0.445 +/- 0.104

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXhXcpXXX
(φψ)-conformation: bbpplbppb
Pattern: [CILTVY][dhkqsw][AGLPV][dekpq][DGN][ehkr][aeps]x[fiklv][afiltv]
Conservation:0.388-1.194-0.812-0.0222.2290.736-0.423-0.480-0.8250.402
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bsg_*_2441bsg   -250259TWPPGRAPIVEE-TTS--EEbbxpvbxxbb
1bue_A_2441bue   A250259VWPKNRAPLIEE-TTS--EEbbxxlbxxbb
1ctt_*_1461ctt   -147156IHLPGREAHAEE-TTS--EEbbbxvbxxbx
1cvr_A_4121cvr   A417426VVGYNKVTVIEE-TTB--EEbbbplbxxbb
1d0c_A_2931d0c   A295304LQAPDEAPELEE-TTS--EEbbxplbxxbb
1dmh_A_2241dmh   A229238VSADGHRKLTEE-TTB--EEbbbpvbxxxb
1hzo_A_2431hzo   A250259IWPENHAPLIEE-TTS--EEbbxplbxpbb
1l9m_A_5681l9m   A575584CKVPDESEVVEE-TTS--EEbbbpvbpxbx
1mjt_A_1601mjt   A162171YQLPNESVKFEE-TTS--EEbbxxvbxxbb
1nd4_A_351nd4   A3948LSAQGRPVLFEE-TTS--EEbbbpvbpxbb
2shp_A_632shp   A6371YDLYGGEKF.EEETTS-EE.xbxxvbxxb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmh_A_2241dmh   A     FEFE (III) ION H - 224
1dmh_A_2241dmh   A     MCT4-METHYLCATECHOL H - 224
1dmh_A_2241dmh   A     FEFE (III) ION H - 226
1dmh_A_2241dmh   A     MCT4-METHYLCATECHOL H - 226
1dmh_A_2241dmh   A     FEFE (III) ION Q - 240
1dmh_A_2241dmh   A     MCT4-METHYLCATECHOL Q - 240
1hzo_A_2431hzo   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID N - 245
1nd4_A_351nd4   A     ACTACETATE ION F - 48

Clusters included in this Subclass
CLUSTER: HA.5.50
CLUSTER: HA.6.18