Information on SUBCLASS 5.8.1 |
Subclass Accession number: 7945
Subclass: 5.8.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 19.8 +/- 34.0 Average RMSD (Å) : 1.025 +/- 0.206 Consensus geometry
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Consensus Sequence: | XhXcXXXhX |
(φψ)-conformation: | bpplbppbb |
Pattern: | [CIT] | x | [DNV] | [HIL] | [ALY] | [STV] | [GIL] | x | [LP] | [AEQ] | [DGN] | x | [AK] | x | [FLM] | x |
Conservation: | 0.200 | -1.157 | -1.016 | -0.568 | -0.640 | 0.009 | -1.590 | 0.513 | 0.994 | 0.919 | 1.538 | -0.428 | 1.419 | -0.248 | 1.169 | -1.114 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c9h_A_21 | 1c9h | A | 22 | 37 | CVVHYTGMLQNGKKFD | EEEEEEEEETTS-EEE | xbbbbbbbxplbxxab |
1fkl_*_21 | 1fkl | - | 22 | 37 | CVVHYTGMLEDGKKFD | EEEEEEEEETTS-EEE | xbbbbbbbxplbxxab |
1fmt_A_280 | 1fmt | A | 280 | 295 | ILNLLSLQPAGKKAMS | EEEEEEEEETTS--EE | bbxxabbbxpvbxxbx |
1hzo_A_243 | 1hzo | A | 244 | 259 | TNDIAVIWPENHAPLI | EEEEEEEE-TTS--EE | bbbbbbbbxplbxpbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c9h_A_21 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | Y - 26 |
1c9h_A_21 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | G - 28 |
1c9h_A_21 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | F - 36 |
1c9h_A_21 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | D - 37 |
1hzo_A_243 | 1hzo | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | N - 245 |
Clusters included in this Subclass |
CLUSTER: HA.4.75 |
CLUSTER: HA.5.95 |