|
|
|
|
|
|
|
| Information on SUBCLASS 5.8.2 |
|
Subclass Accession number: 7946
Subclass: 5.8.2 
Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 17.6 +/- 17.6 Average RMSD (Å) : 1.233 +/- 0.058 Consensus geometry
|
| Consensus Sequence: | pXXGXpXhp |
| (φψ)-conformation: | bbplbppbb |
| Pattern: | x | [ILM] | [NRY] | [LT] | [FL] | [AST] | [ILV] | [EQR] | [EKP] | [AR] | [G] | x | [HK] | [AET] | [IM] | [RS] | x |
| Conservation: | -1.060 | 0.323 | -0.875 | -0.013 | 0.202 | -0.230 | 0.415 | 0.138 | -0.415 | -0.296 | 3.179 | -1.060 | 0.372 | -0.875 | 0.491 | -0.296 | -1.000 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1fmt_A_280 | 1fmt | A | 280 | 295 | ILNLLSLQPAGKKAMS. | EEEEEEEEETTS--EE. | bbxxabbbxpvbxxbx. |
| 1lyv_A_327 | 1lyv | A | 330 | 346 | DMYTLTIREAGQKTISV | EEEEEEEEETTS--EEE | bbbbbbbbbpvbxxbbb |
| 1rpm_A_1035 | 1rpm | A | 1036 | 1052 | VIRTFAVEKRGVHEIRE | EEEEEEEEETT----EE | bbbbbbbbbxvbxbbbx |
| Clusters included in this Subclass |
| CLUSTER: HA.5.100 |
| For any comment or web-related incidence, send an email to the webmaster. |
|