Information on SUBCLASS 5.9.1 |
Subclass Accession number: 7947
Subclass: 5.9.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 31.5 +/- 24.1 Average RMSD (Å) : 0.271 +/- 0.095 Consensus geometry
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Consensus Sequence: | ppXDXhXph |
(φψ)-conformation: | bbaallabb |
Pattern: | x | x | [tvy] | [ST] | [adt] | [D] | x | [GY] | [adkqr] | [NQST] | [FW] | [KQRST] | x |
Conservation: | -0.789 | -0.988 | -0.384 | 0.446 | -0.650 | 1.995 | 0.409 | 0.120 | -0.843 | -0.082 | 1.981 | -0.389 | -0.826 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a2p_A_96 | 1a2p | A | 96 | 108 | IYKTTDHYQTFTK | EEEESSTTS--EE | bbbbaalvabbbx |
1c7s_A_841 | 1c7s | A | 842 | 854 | IEYSTDGGKQWQR | EEEESSTTSS-EE | bbbbaavvabbbx |
1eur_*_171 | 1eur | - | 174 | 186 | VATSTDGGLTWSH | EEEESSTTSS-EE | bbbbaavvabbbb |
1eur_*_234 | 1eur | - | 238 | 250 | SVYSDDHGRTWRA | EEEESSTTS--EE | xbbbaavvabbbx |
1mgr_A_82 | 1mgr | A | 82 | 94 | DYYTADHYASFRR | EEEESSTTS--EE | bbbbaalvabbbx |
1sll_*_568 | 1sll | - | 570 | 582 | FMYSDDHGDNWTY | EEEESSTTSS-EE | bbbbaalvabbbx |
1sox_A_379 | 1sox | A | 382 | 394 | VDVSLDGGRTWKV | EEEESBTTSS-EE | bbbbaavvabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mgr_A_82 | 1mgr | A | SULSULFATE ANION | H - 88 |
1mgr_A_82 | 1mgr | A | SULSULFATE ANION | Y - 89 |
Clusters included in this Subclass |
CLUSTER: HA.6.25 |