Information on SUBCLASS 5.17.1 |
Subclass Accession number: 7955
Subclass: 5.17.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 3.3 +/- 8.8 Average RMSD (Å) : 0.550 +/- 0.191 Consensus geometry
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Consensus Sequence: | hphpXXXXX |
(φψ)-conformation: | bbaapllbp |
Pattern: | [AIV] | [DKNQ] | [FMPW] | x | x | [AEGN] | [GLMT] | [AKQS] | x | x |
Conservation: | 1.880 | 1.170 | -0.277 | 0.399 | -1.145 | -0.084 | -0.952 | 0.592 | -0.921 | -0.662 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cbg_*_465 | 1cbg | - | 467 | 476 | VDFKNNLKRH | EETTTTTEEE | bxaabllxxb |
1k1x_A_408 | 1k1x | A | 412 | 421 | IKPHYGGSIF | EETTTTTEEE | bbaabvlxxa |
1kc6_A_199 | 1kc6 | A | 200 | 209 | INWAAAMQIQ | EESTTTTEEE | bxaaxllxxb |
1m7x_A_210 | 1m7x | A | 210 | 219 | AQMRPETASL | EE-TTT-EEE | bbaapUvbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k1x_A_408 | 1k1x | A | CACALCIUM ION | K - 413 |
1k1x_A_408 | 1k1x | A | CACALCIUM ION | H - 415 |
Clusters included in this Subclass |
CLUSTER: HA.4.67 |