Information on SUBCLASS 6.3.1 |
Subclass Accession number: 7970
Subclass: 6.3.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 12.6 +/- 21.8 Average RMSD (Å) : 0.929 +/- 0.221 Consensus geometry
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Consensus Sequence: | XpXpppphXh |
(φψ)-conformation: | bbaabappbb |
Pattern: | [aktv] | [civ] | x | [ILMVY] | x | [CKQST] | [egkq] | [ADEKR] | [DEKNY] | [GKQT] | [DENRT] | [acpv] | x | [fiv] |
Conservation: | -0.992 | 0.550 | -1.081 | 1.407 | -1.262 | 0.183 | -0.934 | 0.823 | 0.581 | 0.837 | 1.087 | -0.852 | -1.265 | 0.918 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ebf_A_319 | 1ebf | A | 320 | 333 | VISIKTKRYTNPVV | EEEEEESS-SS-EE | bbbbbbaaxaxxxb |
1ihp_*_383 | 1ihp | - | 386 | 399 | VEMMQCQAEQEPLV | EEEEEESS-SS-EE | bbbbbbaaxaxxbb |
1lev_A_91 | 1lev | A | 91 | 104 | TCVLVTEEDKNAII | EEEEEETT-SS-EE | babbbbaababxxx |
1nuw_A_1091 | 1nuw | A | 1091 | 1104 | TCVLVSEEDKNAII | EEEEEETT-SS-EE | babbbbaababpxx |
1pfq_A_382 | 1pfq | A | 383 | 396 | HICYFQIDKKDCTF | EEEEEETT-S--EE | bxbbbxaabaxbbx |
1rp1_*_415 | 1rp1 | - | 419 | 432 | KITVQKGEEKTVHS | EEEEEETT-SS-EE | bbbbbxaabaxbbb |
4kbp_A_56 | 4kbp | A | 56 | 69 | AVRYWSEKNGRKRI | EEEEEESSS---EE | xbbbbxaaxaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lev_A_91 | 1lev | A | F6PFRUCTOSE-6-PHOSPHATE | E - 97 |
1lev_A_91 | 1lev | A | MNMANGANESE (II) ION | E - 97 |
1lev_A_91 | 1lev | A | MNMANGANESE (II) ION | E - 98 |
1nuw_A_1091 | 1nuw | A | F6PFRUCTOSE-6-PHOSPHATE | E - 1097 |
1nuw_A_1091 | 1nuw | A | PO3PHOSPHITE ION | E - 1097 |
1nuw_A_1091 | 1nuw | A | MGMAGNESIUM ION | E - 1097 |
1nuw_A_1091 | 1nuw | A | PO3PHOSPHITE ION | E - 1098 |
1nuw_A_1091 | 1nuw | A | MGMAGNESIUM ION | E - 1098 |
4kbp_A_56 | 4kbp | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 71 |
Clusters included in this Subclass |
CLUSTER: HA.5.55 |
CLUSTER: HA.7.8 |