Information on SUBCLASS 6.12.1 |
Subclass Accession number: 7983
Subclass: 6.12.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 14.1 +/- 13.6 Average RMSD (Å) : 1.000 +/- 0.346 Consensus geometry
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Consensus Sequence: | XhhXGpXhXX |
(φψ)-conformation: | bbpplbppbb |
Pattern: | x | x | x | [ILVY] | [ADP] | [G] | x | x | [GMP] | [ITV] | [FIMT] | x | x |
Conservation: | -0.354 | -0.545 | -0.736 | 0.257 | 0.214 | 2.968 | -0.233 | -0.888 | -0.097 | 0.605 | -0.163 | -0.926 | -0.103 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d7u_A_395 | 1d7u | A | 395 | 407 | IVQLPGMGGVFRI | EE--TTS--EEEE | bbbbpvbxpbxbb |
1k2x_B_294 | 1k2x | B | 298 | 310 | AWGYAGDTPTTGI | EE--TTS--EEEE | bbbxpvbxxbbba |
1lvm_A_73 | 1lvm | A | 74 | 86 | QHLIDGRDMIIIR | EEE-TTSS-EEEE | bbxxpvbxbbbxx |
3grs_*_260 | 3grs | - | 266 | 278 | VTAVPGRLPVMTM | EE--TTS--EEEE | bbbxxvbxxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d7u_A_395 | 1d7u | A | LCSL-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE | R - 406 |
Clusters included in this Subclass |
CLUSTER: HA.6.86 |
CLUSTER: HA.8.31 |