Information on SUBCLASS 7.8.1 |
Subclass Accession number: 7999
Subclass: 7.8.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 17.9 +/- 15.2 Average RMSD (Å) : 1.100 +/- 0.346 Consensus geometry
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Consensus Sequence: | hXNhXXXpEXX |
(φψ)-conformation: | bblaabaapbp |
Pattern: | [CGV] | x | [N] | [LY] | x | [GKT] | [KPT] | [DHK] | [E] | [FKM] | x | x | x |
Conservation: | -0.680 | -0.738 | 2.137 | 0.538 | -0.565 | -0.623 | -0.336 | -0.221 | 1.619 | -0.508 | -0.623 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a76_*_183 | 1a76 | - | 185 | 197 | VRNLTTTKEMPEL | EESSSS-SS--EE | bbvaabaabxpbb |
1b7b_A_235 | 1b7b | A | 235 | 245 | CINYGKPDEKQ.. | EETTTSTT-EE.. | bxlaaxaapbx.. |
1fno_A_375 | 1fno | A | 375 | 386 | GYNYHGKHEFVT. | EESTTSTT-EEE. | xblaabaaxbbb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fno_A_375 | 1fno | A | MSESELENOMETHIONINE | G - 375 |
1fno_A_375 | 1fno | A | ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS | Y - 378 |
1fno_A_375 | 1fno | A | ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS | H - 379 |
1fno_A_375 | 1fno | A | MSESELENOMETHIONINE | H - 382 |
1fno_A_375 | 1fno | A | MSESELENOMETHIONINE | V - 385 |
1fno_A_375 | 1fno | A | MSESELENOMETHIONINE | T - 386 |
Clusters included in this Subclass |
CLUSTER: HA.8.18 |