Information on SUBCLASS 1.2.2 |
Subclass Accession number: 80
Subclass: 1.2.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 8.5 +/- 12.6 Average RMSD (Å) : 0.562 +/- 0.169 Consensus geometry
|
Consensus Sequence: | XXhXh |
(φψ)-conformation: | aapbb |
Pattern: | x | x | [acilvw] | x | x | x | x | [afvy] |
Conservation: | 0.004 | -1.371 | 0.396 | -0.671 | -0.377 | 1.970 | -0.471 | 0.519 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1byr_A_131 | 1byr | A | 143 | 150 | DRWNQGRD | HHHHT-EE | aaaaaxbp |
1dz4_A_219 | 1dz4 | A | 221 | 228 | SIVANGQV | HHHHT-EE | aaaaaxbb |
1ewk_A_447 | 1ewk | A | 452 | 459 | DFLIKSSF | HHHHT-EE | aaaaaxbb |
1lg7_A_102 | 1lg7 | A | 111 | 118 | LGSSNLKA | HHHHT-EE | aaaaaxbx |
1o7f_A_344 | 1o7f | A | 349 | 356 | ELAGVLIF | HHHHH-EE | aaaaapbb |
1o7f_A_49 | 1o7f | A | 54 | 61 | QICLCGYY | HHHHH-EE | aaaaaxbb |
1qks_A_464 | 1qks | A | 464 | 471 | AEISGSVA | HHHHT-EE | aaaaabbx |
1qlm_A_219 | 1qlm | A | 229 | 236 | CILYGGTV | HHHHH-EE | aaaaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lg7_A_102 | 1lg7 | A | CEAS-HYDROXY-CYSTEINE | L - 108 |
1lg7_A_102 | 1lg7 | A | CEAS-HYDROXY-CYSTEINE | L - 111 |
1lg7_A_102 | 1lg7 | A | CEAS-HYDROXY-CYSTEINE | G - 112 |
1lg7_A_102 | 1lg7 | A | CEAS-HYDROXY-CYSTEINE | N - 115 |
1qlm_A_219 | 1qlm | A | PO4PHOSPHATE ION | I - 230 |
Clusters included in this Subclass |
CLUSTER: HE.1.17 |
CLUSTER: HE.2.34 |
CLUSTER: HE.3.53 |