Information on SUBCLASS 8.3.1 |
Subclass Accession number: 8010
Subclass: 8.3.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 61.7 +/- 14.7 Average RMSD (Å) : 0.325 +/- 0.050 Consensus geometry
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Consensus Sequence: | pXGXEhGVXGph |
(φψ)-conformation: | bbgaaalbbpbb |
Pattern: | [KL] | [LV] | [IL] | [HIV] | [G] | [NS] | [GS] | [G] | [AD] | [E] | [FLY] | [G] | [V] | x | [G] | [RY] | [ILV] | [FT] | [A] | [RY] |
Conservation: | -1.115 | -0.368 | -0.072 | -1.164 | 1.603 | -0.179 | -0.448 | 1.603 | -1.003 | 1.032 | -0.576 | 1.603 | 0.462 | -1.279 | 1.603 | -0.513 | -0.329 | -0.807 | 0.462 | -0.513 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1flg_A_169 | 1flg | A | 170 | 189 | LLIHGSSGDEFGVVGRLFAR | EEEE--B-GGG--B-EEEEE | bbbbbbbgaaavbbpbbbbb |
1h4i_A_168 | 1h4i | A | 168 | 187 | KVIIGSSGAELGVRGYLTAY | EEEE--B-GGGT---EEEEE | bbxbxbbgaaavxxxbbbbb |
1kb0_A_176 | 1kb0 | A | 176 | 195 | KVIIGNGGAEYGVRGYITAY | EEEE--B-TTT--B-EEEEE | bxbbbbbNaaaSbbxbbbbb |
1lrw_A_168 | 1lrw | A | 168 | 187 | LVLVGSSGAELGVRGYVTAY | EEEE--B-GGGT---EEEEE | bbxbxbbgaaavxxxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h4i_A_168 | 1h4i | A | AC1PQQ BINDING SITE FOR CHAIN A | S - 174 |
1h4i_A_168 | 1h4i | A | AC1PQQ BINDING SITE FOR CHAIN A | G - 175 |
1h4i_A_168 | 1h4i | A | AC2CA BINDING SITE FOR CHAIN A | E - 177 |
Clusters included in this Subclass |
CLUSTER: HA.10.10 |