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Information on SUBCLASS 8.3.1
Subclass Accession number: 8010
Subclass: 8.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 61.7 +/- 14.7
Average RMSD (Å) : 0.325 +/- 0.050

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXGXEhGVXGph
(φψ)-conformation: bbgaaalbbpbb
Pattern: [KL][LV][IL][HIV][G][NS][GS][G][AD][E][FLY][G][V]x[G][RY][ILV][FT][A][RY]
Conservation:-1.115-0.368-0.072-1.1641.603-0.179-0.4481.603-1.0031.032-0.5761.6030.462-1.2791.603-0.513-0.329-0.8070.462-0.513
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1flg_A_1691flg   A170189LLIHGSSGDEFGVVGRLFAREEEE--B-GGG--B-EEEEEbbbbbbbgaaavbbpbbbbb
1h4i_A_1681h4i   A168187KVIIGSSGAELGVRGYLTAYEEEE--B-GGGT---EEEEEbbxbxbbgaaavxxxbbbbb
1kb0_A_1761kb0   A176195KVIIGNGGAEYGVRGYITAYEEEE--B-TTT--B-EEEEEbxbbbbbNaaaSbbxbbbbb
1lrw_A_1681lrw   A168187LVLVGSSGAELGVRGYVTAYEEEE--B-GGGT---EEEEEbbxbxbbgaaavxxxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1flg_A_1691flg   A     PQQPYRROLOQUINOLINE QUINONE S - 175
1flg_A_1691flg   A     PQQPYRROLOQUINOLINE QUINONE S - 176
1flg_A_1691flg   A     PQQPYRROLOQUINOLINE QUINONE G - 177
1flg_A_1691flg   A     CACALCIUM ION D - 178
1flg_A_1691flg   A     PQQPYRROLOQUINOLINE QUINONE D - 178
1flg_A_1691flg   A     CACALCIUM ION E - 179
1flg_A_1691flg   A     PQQPYRROLOQUINOLINE QUINONE E - 179
1h4i_A_1681h4i   A     PQQPYRROLOQUINOLINE QUINONE S - 173
1h4i_A_1681h4i   A     PQQPYRROLOQUINOLINE QUINONE S - 174
1h4i_A_1681h4i   A     PQQPYRROLOQUINOLINE QUINONE G - 175
1h4i_A_1681h4i   A     PQQPYRROLOQUINOLINE QUINONE A - 176
1h4i_A_1681h4i   A     CACALCIUM ION A - 176
1h4i_A_1681h4i   A     PQQPYRROLOQUINOLINE QUINONE E - 177
1h4i_A_1681h4i   A     CACALCIUM ION E - 177
1kb0_A_1761kb0   A     PQQPYRROLOQUINOLINE QUINONE N - 181
1kb0_A_1761kb0   A     PQQPYRROLOQUINOLINE QUINONE G - 182
1kb0_A_1761kb0   A     PQQPYRROLOQUINOLINE QUINONE G - 183
1kb0_A_1761kb0   A     CACALCIUM ION A - 184
1kb0_A_1761kb0   A     PQQPYRROLOQUINOLINE QUINONE A - 184
1kb0_A_1761kb0   A     CACALCIUM ION E - 185
1kb0_A_1761kb0   A     TFBTETRAHYDROFURAN-2-CARBOXYLIC ACID E - 185
1kb0_A_1761kb0   A     PQQPYRROLOQUINOLINE QUINONE E - 185
1kb0_A_1761kb0   A     PQQPYRROLOQUINOLINE QUINONE V - 188
1lrw_A_1681lrw   A     PQQPYRROLOQUINOLINE QUINONE L - 178
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h4i_A_1681h4i   A AC1PQQ BINDING SITE FOR CHAIN AS - 174
1h4i_A_1681h4i   A AC1PQQ BINDING SITE FOR CHAIN AG - 175
1h4i_A_1681h4i   A AC2CA BINDING SITE FOR CHAIN AE - 177

Clusters included in this Subclass
CLUSTER: HA.10.10