Information on SUBCLASS 8.4.1 |
Subclass Accession number: 8011
Subclass: 8.4.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 11.9 +/- 18.7 Average RMSD (Å) : 0.975 +/- 0.126 Consensus geometry
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Consensus Sequence: | XXXXpXXXchhX |
(φψ)-conformation: | bppaabpglpbb |
Pattern: | [ALT] | x | x | x | [KPT] | [ENT] | x | [EPT] | x | [GN] | [LMP] | [IVW] | x | x |
Conservation: | 0.017 | -1.418 | -1.418 | -0.914 | 0.798 | 0.628 | -0.021 | 0.530 | -0.685 | 2.281 | 0.258 | 0.835 | -0.410 | -0.482 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e9g_A_57 | 1e9g | A | 57 | 70 | LEITKEETLNPIIQ | EEE-TTSTT--EEE | xbpxaabxvlxxbx |
1inl_A_228 | 1inl | A | 233 | 246 | LGFMTTYPSGMWSY | EEE-TTSTTSEEEE | bbxbaabpgvbbbb |
1iy9_A_213 | 1iy9 | A | 218 | 231 | TANIPTYPSGLWTF | EE--TTSGGG-EEE | bbxbaabpvvbbbb |
1jhd_A_98 | 1jhd | A | 100 | 113 | ALRDPNVEGNPVLA | EEE-TTSTT--EEE | bbbxaabpvlxxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e9g_A_57 | 1e9g | A | MNMANGANESE (II) ION | E - 58 |
1e9g_A_57 | 1e9g | A | PO4PHOSPHATE ION | E - 58 |
1e9g_A_57 | 1e9g | A | MNMANGANESE (II) ION | K - 61 |
1e9g_A_57 | 1e9g | A | PO4PHOSPHATE ION | K - 61 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e9g_A_57 | 1e9g | A | ASAACTIVE SITE A. | E - 58 |
Clusters included in this Subclass |
CLUSTER: HA.7.45 |
CLUSTER: HA.8.27 |