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Information on SUBCLASS 8.7.1
Subclass Accession number: 8014
Subclass: 8.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 35.3 +/- 17.9
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: pXXcpXXGSphX
(φψ)-conformation: bbababpgppbb
Pattern: [KN][C][L][DT][AST]x[DG][HTY][AKS][NPQ][G][S][KTY][IV]x[IL][MY]
Conservation:-0.0772.9470.525-0.274-0.498-1.090-0.136-0.552-0.713-0.7671.4940.525-1.0360.292-0.6590.059-0.041
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1abr_B_1911abr   B194210NCLTSKDHKQGSTILLMEEEEESSSSTT-BEEEEbbxbbabaxxgpxbbbb
1abr_B_671abr   B6783KCLTTYGYAPGSYVMIYEEEEES-SSTT-BEEEEpxxbxababpgxxbbxb
1knl_A_571knl   A5773KCLDAAGTSNGSKVQIYEEEEES-SSTT-BEEEEbbxbxababpvpxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1knl_A_571knl   A     GOLGLYCEROL D - 60
1knl_A_571knl   A     GOLGLYCEROL A - 61
1knl_A_571knl   A     GOLGLYCEROL A - 62
1knl_A_571knl   A     GOLGLYCEROL G - 63
1knl_A_571knl   A     GOLGLYCEROL Q - 71
1knl_A_571knl   A     GOLGLYCEROL Y - 73
1knl_A_571knl   A     GOLGLYCEROL S - 74

Clusters included in this Subclass
CLUSTER: HA.9.12