Information on SUBCLASS 8.7.1 |
Subclass Accession number: 8014
Subclass: 8.7.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 35.3 +/- 17.9 Average RMSD (Å) : 0.300 +/- 0.000 Consensus geometry
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Consensus Sequence: | pXXcpXXGSphX |
(φψ)-conformation: | bbababpgppbb |
Pattern: | [KN] | [C] | [L] | [DT] | [AST] | x | [DG] | [HTY] | [AKS] | [NPQ] | [G] | [S] | [KTY] | [IV] | x | [IL] | [MY] |
Conservation: | -0.077 | 2.947 | 0.525 | -0.274 | -0.498 | -1.090 | -0.136 | -0.552 | -0.713 | -0.767 | 1.494 | 0.525 | -1.036 | 0.292 | -0.659 | 0.059 | -0.041 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1abr_B_191 | 1abr | B | 194 | 210 | NCLTSKDHKQGSTILLM | EEEEESSSSTT-BEEEE | bbxbbabaxxgpxbbbb |
1abr_B_67 | 1abr | B | 67 | 83 | KCLTTYGYAPGSYVMIY | EEEEES-SSTT-BEEEE | pxxbxababpgxxbbxb |
1knl_A_57 | 1knl | A | 57 | 73 | KCLDAAGTSNGSKVQIY | EEEEES-SSTT-BEEEE | bbxbxababpvpxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1knl_A_57 | 1knl | A | GOLGLYCEROL | D - 60 |
1knl_A_57 | 1knl | A | GOLGLYCEROL | A - 61 |
1knl_A_57 | 1knl | A | GOLGLYCEROL | A - 62 |
1knl_A_57 | 1knl | A | GOLGLYCEROL | G - 63 |
1knl_A_57 | 1knl | A | GOLGLYCEROL | Q - 71 |
1knl_A_57 | 1knl | A | GOLGLYCEROL | Y - 73 |
1knl_A_57 | 1knl | A | GOLGLYCEROL | S - 74 |
Clusters included in this Subclass |
CLUSTER: HA.9.12 |