Information on SUBCLASS 9.7.1 |
Subclass Accession number: 8027
Subclass: 9.7.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 30.0 +/- 23.2 Average RMSD (Å) : 1.025 +/- 0.126 Consensus geometry
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Consensus Sequence: | hcXXXXXpGRhXp |
(φψ)-conformation: | bpaaapaagbpbb |
Pattern: | x | [AFV] | [KNP] | [PQ] | [AENS] | x | [AT] | x | [DT] | [G] | [R] | [ALP] | [GST] | x | x |
Conservation: | -1.041 | -0.445 | -0.177 | 0.863 | -0.440 | -1.144 | 0.516 | -0.530 | 0.223 | 2.352 | 1.786 | -0.619 | -0.199 | -0.723 | -0.421 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ftr_A_53 | 1ftr | A | 60 | 74 | YVPPEETPDGRPGVT | EE-GGGSTTSS-EEE | bbxaaabaavbxbbb |
1l3s_A_605 | 1l3s | A | 605 | 619 | IFNQALTQTGRLSST | EEESS--SSS--EEE | bxxaaaxaagxxbbb |
1m5h_A_53 | 1m5h | A | 59 | 73 | KAKPSETPDGRPGYY | EE-GGGSTTS--EEE | xbxaaaxaavbxbbx |
1t7p_A_419 | 1t7p | A | 419 | 433 | SVNPNGAVTGRATHA | EEETT-STTS--EEE | xbxaaaxaagxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | I - 605 |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | F - 606 |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | N - 607 |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | Q - 608 |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | A - 609 |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | L - 610 |
1l3s_A_605 | 1l3s | A | SUCSUCROSE | T - 619 |
1t7p_A_419 | 1t7p | A | 2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE | R - 429 |
1t7p_A_419 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | R - 429 |
Clusters included in this Subclass |
CLUSTER: HA.9.13 |