Information on SUBCLASS 9.8.1 |
Subclass Accession number: 8028
Subclass: 9.8.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 34.6 +/- 29.3 Average RMSD (Å) : 0.400 +/- 0.200 Consensus geometry
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Consensus Sequence: | XXpchcXXIXXXP |
(φψ)-conformation: | bbaaabaabblpp |
Pattern: | [ARS] | [av] | [EN] | [DGK] | [LV] | [DN] | [PQS] | [AT] | [IV] | [dqs] | [AGR] | [al] | [P] |
Conservation: | -0.554 | -0.753 | 0.453 | -0.653 | 0.193 | 0.784 | -0.467 | 0.158 | 0.733 | -1.073 | -0.653 | -0.787 | 2.619 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1llp_*_180 | 1llp | - | 180 | 192 | AVNDVDPTVQGLP | EESSSSTT-S-EE | bbaaaxaabbvxx |
1lyc_A_187 | 1lyc | A | 187 | 199 | SQEGLNSAIFRSP | EESSS-GGGTTEE | bbaaabaabpvxx |
1mn1_*_177 | 1mn1 | - | 177 | 189 | RANKVDQTIDAAP | EESSSSTT---EE | bbaaabaabblxx |
1qpa_A_180 | 1qpa | A | 180 | 192 | AANDVDPTISGLP | EESSSSTT-S-EE | bbaaaxaabbvxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.8.11 |