Information on SUBCLASS 11.2.1 |
Subclass Accession number: 8037
Subclass: 11.2.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 78.2 +/- 13.0 Average RMSD (Å) : 0.100 +/- 0.000 Consensus geometry
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Consensus Sequence: | SMANXGXcTNGSQFF |
(φψ)-conformation: | bppbaeplapFapbb |
Pattern: | [LVW] | [LV] | [S] | [M] | [A] | [N] | [AKS] | [G] | [kps] | [DNS] | [T] | [N] | [G] | [CS] | [Q] | [F] | [F] | [IL] | [CT] |
Conservation: | -1.521 | -0.799 | 0.008 | 0.555 | 0.008 | 1.101 | -1.374 | 1.101 | -1.636 | -0.902 | 0.555 | 1.101 | 1.101 | -0.873 | 0.555 | 1.101 | 1.101 | -0.508 | -0.674 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a33_*_108 | 1a33 | - | 108 | 126 | VVSMANKGPNTNGSQFFIT | EEEE--SSTT-B-S-EEEE | xbbxxbaewlaxFaxbbbx |
1cyn_A_105 | 1cyn | A | 105 | 123 | WVSMANAGKDTNGSQFFIT | EEEE--SSTT-B-S-EEEE | xbbxxbaeplaxFaxbbbx |
1dyw_A_104 | 1dyw | A | 104 | 122 | VLSMANAGPNTNGSQFFLC | EEEE--SSTT-B-S-EEEE | xbbxxbaewlaxFaxbbbx |
1h0p_A_121 | 1h0p | A | 121 | 139 | WLSMANAGADTNGSQFFIT | EEEE--SSTT-B-S-EEEE | bbbxxbaeplaxFaxbbbx |
1ihg_A_117 | 1ihg | A | 117 | 135 | LLSMANAGSNTNGSQFFIT | EEEE--SSTT-B-S-EEEE | xbbxxbaeplaxFaxbbbx |
1mzw_A_109 | 1mzw | A | 109 | 127 | LLSMANSGPSTNGCQFFIT | EEEE--SSTT-B-S-EEEE | xxbxxbaeplaxFaxbbbx |
2rmc_A_131 | 2rmc | A | 131 | 149 | WVSMANAGPDTNGSQFFIT | EEEE--SSTT-B-S-EEEE | xbbxxbaeplaxFaxbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1dyw_A_104 | 1dyw | A | CBSCYCLOSPORIN BINDING SITE | A - 108 |
1dyw_A_104 | 1dyw | A | CBSCYCLOSPORIN BINDING SITE | N - 109 |
1dyw_A_104 | 1dyw | A | CBSCYCLOSPORIN BINDING SITE | Q - 118 |
1dyw_A_104 | 1dyw | A | CBSCYCLOSPORIN BINDING SITE | F - 120 |
Clusters included in this Subclass |
CLUSTER: HA.10.3 |