Information on SUBCLASS 11.3.1 |
Subclass Accession number: 8038
Subclass: 11.3.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 47.0 +/- 25.6 Average RMSD (Å) : 0.380 +/- 0.084 Consensus geometry
|
Consensus Sequence: | pShSKchGLhcXRVG |
(φψ)-conformation: | bbaaaaalaaaalbb |
Pattern: | [LV] | [FHIL] | [CIV] | [AV] | x | [S] | [CFLY] | [S] | [K] | [DN] | [FLM] | [G] | [IL] | [PY] | [GNR] | [EF] | [R] | [TV] | [G] | [acn] | [CIL] | [LTY] | [asv] |
Conservation: | -0.030 | -1.081 | -0.234 | -0.280 | -1.140 | 0.817 | -0.803 | 0.817 | 1.397 | 0.606 | -0.196 | 1.977 | 0.307 | -0.186 | -0.598 | -0.712 | 1.397 | -0.142 | 1.977 | -1.349 | -0.419 | -0.976 | -1.151 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ajs_A_250 | 1ajs | A | 250 | 272 | LFCAQSFSKNFGLYNERVGNLTV | EEEEEE-TTTS--GGG-EEEEEE | bbbxbbaaaaavaaaalbbbbxb |
1ars_*_250 | 1ars | - | 250 | 272 | LIVASSYSKNFGLYNERVGACTL | EEEEEE-TTTTT-GGG-EEEEEE | bbbxbbaaaaalaaaalbbbbbb |
1iay_A_270 | 1iay | A | 270 | 292 | VHIVYSLSKDMGLPGFRVGIIYS | EEEEEESTTTSS-GGG-EEEEEE | bbbbbbaaaaavaaaalxbbbbx |
1m7y_A_265 | 1m7y | A | 265 | 287 | VHVVYSLSKDLGLPGFRVGAIYS | EEEEEESSSSS--GGG-EEEEEE | bbbbbbaaaaavaaaalbbbbbb |
2ay1_A_250 | 2ay1 | A | 250 | 272 | VLIAASCSKNFGIYRERTGCLLA | EEEEEE-TTTTT-GGG-EEEEEE | bbbbxbaaaaavaaaavbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.10.6 |