Information on SUBCLASS 12.1.2 |
Subclass Accession number: 8040
Subclass: 12.1.2 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 33.3 +/- 16.0 Average RMSD (Å) : 0.367 +/- 0.153 Consensus geometry
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Consensus Sequence: | hXHXXhpppTXpXDIh |
(φψ)-conformation: | bppaapbaaalplpbb |
Pattern: | x | x | [HIL] | [DEP] | [IV] | x | x | [IV] | [FI] | x | [H] | [NP] | [ANR] | [FY] | [NST] | [KS] | [EKS] | [T] | [ITY] | [DS] | x | [D] | [I] | [AM] | [LV] | [L] | [HKR] | [L] |
Conservation: | -1.168 | -0.983 | -0.983 | -0.366 | 0.486 | -0.983 | -0.983 | 0.483 | -0.137 | -1.106 | 2.963 | -0.009 | -0.921 | 1.291 | -0.305 | -0.079 | -0.490 | 1.298 | -0.983 | 0.138 | -0.486 | 1.853 | 0.743 | -0.479 | -0.036 | 0.743 | -0.243 | 0.743 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aut_C_81 | 1aut | C | 81 | 108 | LDLDIKEVFVHPNYSKSTTDNDIALLHL | EEEEEEEEEE-TT-BTTTTBT--EEEEE | bxbbxabbbxpaaxbaaavxlxbbbxbp |
1fi8_A_81 | 1fi8 | A | 81 | 108 | QIIPVVKIIPHPAYNSKTISNDIMLLKL | EEEEEEEEEE-TT-BTTTTBS--EEEEE | bxbxxabxbxxaapbaaavxlxbbbbxx |
1fxy_A_80 | 1fxy | A | 81 | 108 | AVHEVEVVIKHNRFTKETYDFDIAVLRL | EEEEEEEEEE-TT-BTTTTBT--EEEEE | bbbxxabbbxxaaxbaaavxvxbbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aut_C_81 | 1aut | C | DPND-PHENYLALANINE | K - 96 |
1aut_C_81 | 1aut | C | DPND-PHENYLALANINE | S - 97 |
1aut_C_81 | 1aut | C | DPND-PHENYLALANINE | T - 98 |
1aut_C_81 | 1aut | C | DPND-PHENYLALANINE | T - 99 |
1aut_C_81 | 1aut | C | MAIDEOXO-METHYLARGININE | T - 99 |
1aut_C_81 | 1aut | C | MAIDEOXO-METHYLARGININE | D - 102 |
1fxy_A_80 | 1fxy | A | DPND-PHENYLALANINE | Y - 99 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1aut_C_81 | 1aut | C | CATCATALYTIC SITE. | D - 102 |
Clusters included in this Subclass |
CLUSTER: HA.12.12 |