Logo
Information on SUBCLASS 12.1.2
Subclass Accession number: 8040
Subclass: 12.1.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 33.3 +/- 16.0
Average RMSD (Å) : 0.367 +/- 0.153

Consensus geometry
d (Å): 1 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXHXXhpppTXpXDIh
(φψ)-conformation: bppaapbaaalplpbb
Pattern: xx[HIL][DEP][IV]xx[IV][FI]x[H][NP][ANR][FY][NST][KS][EKS][T][ITY][DS]x[D][I][AM][LV][L][HKR][L]
Conservation:-1.168-0.983-0.983-0.3660.486-0.983-0.9830.483-0.137-1.1062.963-0.009-0.9211.291-0.305-0.079-0.4901.298-0.9830.138-0.4861.8530.743-0.479-0.0360.743-0.2430.743
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aut_C_811aut   C81108LDLDIKEVFVHPNYSKSTTDNDIALLHLEEEEEEEEEE-TT-BTTTTBT--EEEEEbxbbxabbbxpaaxbaaavxlxbbbxbp
1fi8_A_811fi8   A81108QIIPVVKIIPHPAYNSKTISNDIMLLKLEEEEEEEEEE-TT-BTTTTBS--EEEEEbxbxxabxbxxaapbaaavxlxbbbbxx
1fxy_A_801fxy   A81108AVHEVEVVIKHNRFTKETYDFDIAVLRLEEEEEEEEEE-TT-BTTTTBT--EEEEEbbbxxabbbxxaaxbaaavxvxbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aut_C_811aut   C     DPND-PHENYLALANINE K - 96
1aut_C_811aut   C     DPND-PHENYLALANINE S - 97
1aut_C_811aut   C     DPND-PHENYLALANINE T - 98
1aut_C_811aut   C     DPND-PHENYLALANINE T - 99
1aut_C_811aut   C     MAIDEOXO-METHYLARGININE T - 99
1aut_C_811aut   C     MAIDEOXO-METHYLARGININE D - 102
1fxy_A_801fxy   A     DPND-PHENYLALANINE Y - 99
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1aut_C_811aut   C CATCATALYTIC SITE.D - 102

Clusters included in this Subclass
CLUSTER: HA.12.12