Logo
Information on SUBCLASS 15.1.1
Subclass Accession number: 8052
Subclass: 15.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 61.2 +/- 19.4
Average RMSD (Å) : 0.540 +/- 0.251

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXhWNPppLXXMALXPCXh
(φψ)-conformation: bbapbaaaaaapabppaba
Pattern: [IL][LMTV][cs][AL][W][N][PV][ADEKR][DE][LV][DEP][akqt][M][A][L][PT][P][C][HV][aimt][EFL][CTY][Q][FW][Y][V]
Conservation:-0.186-0.821-0.824-0.7152.7350.882-0.336-1.0610.149-0.353-0.569-1.2680.5110.1400.140-0.2141.2531.994-0.454-1.238-1.185-0.7540.5110.2691.2530.140
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkp_A_1441bkp   A144169ITMLWNPDELDAMALTPCVYETQWYVEEES--TTTGGGBSS--SEEEEEEEEbbbaxxaaaaaababxxaxabbbbbb
1f28_A_1561f28   A156181ILSAWNPADLEKMALPPCHMFCQFYVEEE---TTTGGGSSS--SEEEEEEEEbbbaxbaaaaaaxabxpaxabbbbbx
1hvy_A_1781hvy   A178203IMCAWNPRDLPLMALPPCHALCQFYVEEE---TTTGGG-SS--SEEEEEEEEbbbaxbaaaaaaxabppababbbbbb
1j3k_C_4731j3k   C473498LLCAWNVKDLDQMALPPCHILCQFYVEEE---GGGGGGSSS--SEEEEEEEEbbbaxxaaaaaaxabwxaxabbbbbb
1tsy_*_1811tsy   -181206IVSAWNPEDVPTMALPPCHTLYQFYVEEE---TTTGGG-SS--SEEEEEEEEbbbabbaaaaaaxabxpaxabbbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f28_A_1561f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 170
1f28_A_1561f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID L - 170
1f28_A_1561f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE P - 171
1f28_A_1561f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE P - 172
1f28_A_1561f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE C - 173
1f28_A_1561f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 174
1f28_A_1561f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID H - 174
1hvy_A_1781hvy   A     D16TOMUDEX L - 192
1hvy_A_1781hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 192
1hvy_A_1781hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE P - 193
1hvy_A_1781hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE P - 194
1hvy_A_1781hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE C - 195
1hvy_A_1781hvy   A     D16TOMUDEX H - 196
1hvy_A_1781hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 196
1j3k_C_4731j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 487
1j3k_C_4731j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE P - 488
1j3k_C_4731j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE C - 490
1j3k_C_4731j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 491
1tsy_*_1811tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 195
1tsy_*_1811tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE P - 196
1tsy_*_1811tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE C - 198
1tsy_*_1811tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 199
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bkp_A_1441bkp   A CAACATALYTIC CYSTEINE.C - 161

Clusters included in this Subclass
CLUSTER: HA.14.3