ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 15.3.1

Subclass Accession number: 8054
Subclass: 15.3.1

Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 29.8 +/- 17.6
Average RMSD (Å) : 0.533 +/- 0.115

Consensus geometry

d (Å): 3

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	pGhGXpXXXphXhXppLpX
(φψ)-conformation:	beappabaapabppabpbb

Pattern:	[EKS]	[C]	[EK]	[ILV]	[ST]	[G]	[FWY]	[G]	[AK]	[EHT]	[ADE]	[APS]	x	[DS]	[LPY]	x	[PY]	[PS]	[DE]	[QRT]	[L]	[KR]	[EM]	[ATV]	x	[V]	[KRT]	[LV]
Conservation:	-0.468	3.290	0.228	-0.006	0.191	1.729	0.688	1.729	-0.337	-0.699	-0.642	-0.642	-1.220	-0.138	-1.162	-1.104	-0.202	-0.310	0.548	-0.642	0.688	0.473	-0.478	-0.642	-0.989	0.688	-0.526	-0.047

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a5h_A_135	1a5h	A	135	162	ECELSGYGKHEALSPFYSERLKEAHVRL	EEEEEESS-SSTT-S---SB-EEEEEEE	xbbbbeaxpabaaxabxxabpbbbbbxx
1gj7_B_135	1gj7	B	135	162	SCEITGFGKEASTDYLYPEQLKMTVVKL	EEEEEES--SSTT-SS--SB-EEEEEEE	xbbbbeaxpabaaxabbxabxbbbbbbx
1mza_A_135	1mza	A	135	162	KCKVTGWGATDPDSLRPSDTLREVTVTV	EEEEEE---SSTT-SS--SB-EEEEEEE	xbbbbeapxabaaxabxxabpbbbxbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1gj7_B_135	1gj7	B	1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE	I - 138
1gj7_B_135	1gj7	B	1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE	K - 143
1gj7_B_135	1gj7	B	1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE	Y - 151
1gj7_B_135	1gj7	B	1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE	V - 160

Clusters included in this Subclass