ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 18.3.1

Subclass Accession number: 8057
Subclass: 18.3.1

Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7.1 (>75 %)  2.7.1.112
GO : GO:0004672 (>75 %)  GO:0005515 (>50 %)  GO:0016301 (>75 %)  GO:0016773 (>75 %)
SCOP : 50036 (>75 %)  50044 (>75 %)  50045 (>75 %)

Number of loops: 3

Average sequence ID (%) : 60.3 +/- -6.5
Average RMSD (Å) : 0.333 +/- 0.115

Consensus geometry

d (Å): 5

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	VALYDYEXXpppDLSFpKGpph
(φψ)-conformation:	bpabpbbpabaapbpbbpgpbb

Pattern:	[ILT]	[FV]	[V]	[A]	[L]	[Y]	[D]	[Y]	[E]	[AS]	x	[HT]	[EH]	[DET]	[D]	[L]	[S]	[F]	[HKQ]	[K]	[G]	[DE]	[KQR]	[FLM]	x	[IV]
Conservation:	-1.264	-0.881	0.143	0.143	0.143	1.794	1.244	1.794	0.693	-0.652	-1.594	-0.882	-0.338	-1.081	1.244	0.143	0.143	1.244	-0.958	0.693	1.244	-0.013	-0.652	-0.897	-1.322	-0.129

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1fmk_*_84	1fmk	-	85	110	TFVALYDYESRTETDLSFKKGERLQI	EEEESS-B---SSSB--B-TT-EEEE	xbbxabxbxpabaaxbpbbpvxxbxb
1qcf_A_85	1qcf	A	85	110	IVVALYDYEAIHHEDLSFQKGDQMVV	EEEESS-B---STTB--B-TT-EEEE	bbbxabxbbxabaaxbxbbpgpbbxx
1shf_A_86	1shf	A	86	111	LFVALYDYEARTEDDLSFHKGEKFQI	EEEESS-B--SSSSB--B-TT-EEEE	xbbxabxbbxabaaxbxbbpvpbbbx

Clusters included in this Subclass