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Information on SUBCLASS 7.4.1
Subclass Accession number: 806
Subclass: 7.4.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.37 (>75 %)  
GO : GO:0016614 (>75 %)  GO:0016615 (>75 %)  GO:0016616 (>75 %)  
SCOP : 56326 (>75 %)  56327 (>75 %)  56328 (>75 %)  
Number of loops: 12

Average sequence ID (%) : 8.2 +/- 10.3
Average RMSD (Å) : 1.150 +/- 0.232

Consensus geometry
d (Å): 7 delta (°): 135-180 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXpXpXXXhX
(φψ)-conformation: bbabaapppbb
Pattern: [fiklmtv][AGILVWY]x[knpqrst]x[adeknst][kpst][eknqrs]xxxxx
Conservation:0.1670.982-1.1490.300-1.1550.4551.6951.581-0.711-0.8170.241-0.489-1.100
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1es6_A_2031es6   A205217PGISFHPKLRPILEEEE--TTS--EEwbbbabaabxxbx
1f39_A_2001f39   A202214FLQPLNPQYPMIPEEE-SSTTS--EEbbbxaxaaxxxbp
1gen_*_4921gen   -493505IWRTVTPRDKPMGEEEESSTTS--EEbbbbabaabxxxe
1h4r_A_2701h4r   A272284TIKPLDKKIDVFKEEEESSTTS--EEbbbxaxaaxxxbb
1kt7_A_851kt7   A89101KYWGVASFLQKGNEEEESSTTS--EExbbbaxaaxpbbb
1n13_B_881n13   B95107VAIPKDKSLCGLIEEEESSTTS-BEEbxbxaxaaxxxbb
1nd6_A_2921nd6   A297309MYYRNETQHEPYPEEEE--TTS--EEbbbxabaabxpxx
1oga_E_661oga   E6779SVSREKKESFPLTEE--SSTTB--EEbbbbabaabbwbb
1orv_A_1711orv   A172184IYVKNEPNLSSQREEEESSTTS--EExbbbabaaxxxbx
1qfm_A_991qfm   A100112LYVQDSLEGEARVEEEESSSSS--EExbbbabaaxxxbx
1uwv_A_2301uwv   A230242LYLAPDSEILETVEEEESSSS--EEEbbbbabaaxbxxa
2por_*_2752por   -281293IADNDLPNSDMVAEEEE-SSS---EEbbbbaxaapxxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kt7_A_851kt7   A     RTLRETINOL M - 88
1kt7_A_851kt7   A     RTLRETINOL K - 89
1kt7_A_851kt7   A     RTLRETINOL Y - 90
1kt7_A_851kt7   A     RTLRETINOL W - 91
1kt7_A_851kt7   A     RTLRETINOL F - 96
1kt7_A_851kt7   A     RTLRETINOL L - 97
1kt7_A_851kt7   A     RTLRETINOL Q - 98
1kt7_A_851kt7   A     RTLRETINOL D - 102
1kt7_A_851kt7   A     RTLRETINOL H - 104
1n13_B_881n13   B     PVLPYRUVOYL GROUP G - 105
1n13_B_881n13   B     PVLPYRUVOYL GROUP L - 106
1n13_B_881n13   B     AG2AGMATINE L - 106
1n13_B_881n13   B     PVLPYRUVOYL GROUP I - 107
1n13_B_881n13   B     AG2AGMATINE I - 107
1n13_B_881n13   B     PVLPYRUVOYL GROUP M - 108
1n13_B_881n13   B     AG2AGMATINE M - 108
1n13_B_881n13   B     PVLPYRUVOYL GROUP E - 109
1n13_B_881n13   B     AG2AGMATINE E - 109
1n13_B_881n13   B     MPD2-METHYL-2,4-PENTANEDIOL E - 109
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 299
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE R - 300
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE N - 301
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE E - 302
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 308
1uwv_A_2301uwv   A     MSESELENOMETHIONINE L - 230
1uwv_A_2301uwv   A     MSESELENOMETHIONINE Y - 231
1uwv_A_2301uwv   A     MSESELENOMETHIONINE L - 232
1uwv_A_2301uwv   A     PO4PHOSPHATE ION A - 233
1uwv_A_2301uwv   A     PO4PHOSPHATE ION D - 235
1uwv_A_2301uwv   A     PO4PHOSPHATE ION S - 236
1uwv_A_2301uwv   A     PO4PHOSPHATE ION E - 237
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL I - 277
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL G - 279
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL G - 280
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL I - 281
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL N - 284
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL L - 286
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL P - 287
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL N - 288
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL S - 289
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL A - 293
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL D - 294
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL L - 295
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL G - 296
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL V - 297
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uwv_A_2301uwv   A AC5PO4 BINDING SITE FOR CHAIN AS - 236

Clusters included in this Subclass
CLUSTER: HA.6.73
CLUSTER: HA.7.18
CLUSTER: HA.8.13
CLUSTER: HA.8.22