Information on SUBCLASS 0.1.7 |
Subclass Accession number: 8069
Subclass: 0.1.7 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 18 Average sequence ID (%) : 9.0 +/- 13.4 Average RMSD (Å) : 0.606 +/- 0.135 Consensus geometry
|
Consensus Sequence: | XXhX |
(φψ)-conformation: | aabb |
Pattern: | x | [cdeknqry] | x | x | x | [ehkpqt] | x | [afilmtv] | x | x |
Conservation: | -0.740 | -0.573 | -1.147 | -0.100 | -0.339 | 1.140 | 0.012 | 2.069 | -0.322 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b0z_A_163 | 1b0z | A | 163 | 172 | KEEARKRIYV | HHHHGGGEEE | aaaaaaabbb |
1cpt_*_380 | 1cpt | - | 391 | 400 | FEELLPKLKS | HHHHGGGEEE | aaaaaaabab |
1dj2_A_198 | 1dj2 | A | 212 | 220 | ADRLEPYIT. | HHHHTTTEE. | aaaaaaapb. |
1dj3_A_197 | 1dj3 | A | 211 | 219 | AERLEPFIA. | HHHHTTTEE. | aaaaaaapb. |
1dp4_A_267 | 1dp4 | A | 270 | 279 | ARQAFQAAKI | HHHHGGGEEE | aaaaaaabbb |
1hyo_A_266 | 1hyo | A | 266 | 274 | MDALMPFVV. | HHHHGGGEE. | aaaaaaaxb. |
1ivh_A_260 | 1ivh | A | 273 | 282 | TIPYLHVREA | HHHHHTT-EE | aaaaaaaxbb |
1iwe_A_214 | 1iwe | A | 225 | 233 | AERIRPMVR. | HHHHGGGEE. | aaaaaaaxb. |
1ka8_A_4 | 1ka8 | A | 5 | 14 | TFDFIGYLET | HHHHGGGEEE | aaaaaaabbx |
1l5w_A_329 | 1l5w | A | 333 | 342 | WAITSKTFAY | HHHHTTTEEE | aaaaaaaxbb |
1l7d_A_328 | 1l7d | A | 340 | 348 | LNFLTPHVD. | HHHHGGGEE. | aaaaaaaxb. |
1lcy_A_16 | 1lcy | A | 21 | 30 | VEKTAPAVVY | HHHHGGGEEE | aaaaaaaxbb |
1li4_A_107 | 1li4 | A | 112 | 120 | WCIEQTLYF. | HHHHTTTEE. | aaaaaaabx. |
1mio_A_15 | 1mio | A | 18 | 27 | KKTRSGHIVI | HHHHGGGEEE | aaaaaaabbb |
1o9j_A_478 | 1o9j | A | 479 | 488 | EYGIHEYTEV | HHHHGGGEEE | aaaaaaabbx |
1qa7_A_2 | 1qa7 | A | 6 | 15 | AGLVRKNLVQ | HHHHHTTEEE | aaaaaaaxbx |
1qgu_A_21 | 1qgu | A | 24 | 33 | RKERRKHMMV | HHHHGGGEEE | aaaaaaabbb |
3pcg_A_164 | 3pcg | A | 164 | 173 | PQRRETLIAK | HHHHGGGEEE | aaaaaaaxxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 380 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 382 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 383 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 386 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 387 |
1ivh_A_260 | 1ivh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 276 |
1ivh_A_260 | 1ivh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 277 |
1ivh_A_260 | 1ivh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 280 |
1ivh_A_260 | 1ivh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 281 |
1ivh_A_260 | 1ivh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 282 |
1qa7_A_2 | 1qa7 | A | NFAPHENYLALANINE AMIDE | Q - 15 |
1qa7_A_2 | 1qa7 | A | NFAPHENYLALANINE AMIDE | F - 16 |
Clusters included in this Subclass |
CLUSTER: HE.2.29 |
CLUSTER: HE.3.60 |
CLUSTER: HE.4.185 |
CLUSTER: HE.4.211 |
CLUSTER: HE.4.68 |