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Information on SUBCLASS 0.1.9
Subclass Accession number: 8071
Subclass: 0.1.9 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 12.2 +/- 15.2
Average RMSD (Å) : 0.586 +/- 0.196

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: ppXX
(φψ)-conformation: aabp
Pattern: x[adekqrs]x[afgit]xx[acfilm][AGKQS]xxx[adenpq][CILTV]x
Conservation:-1.191-0.110-0.3980.327-0.761-0.7971.3971.338-0.304-0.521-0.8840.2522.200-0.548
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dih_*_1081dih   -111124KQAIRDAAADIAIVHHHHHHHTTTS-EEaaaaaaaaaabxbb
1dih_*_1311dih   -141154EKAAKVMGDYTDIEHHHHHHHTTTSEEEaaaaaaaaaaxxxb
1dlj_A_101dlj   A1326LSLGVLLSLQNEVTHHHHHHHTTTSEEEaaaaaaaaaabxbb
1e9i_A_2971e9i   A301314AYQTKVLGDKIQLVHHHHHHHTTTSEEEaaaaaaaaaabxbx
1exn_A_951exn   A109122KDAFELCKTTFPTFHHHHHHHTTTS-EEaaaaaaaaaabwbb
1f06_A_711f06   A7386PEQAPKFAQFACTVHHHHHHHTTTSEEEaaaaaaaaaabxbb
1i6k_A_231i6k   A2336LRQFVELQHEYNCYHHHHHHHTTTSEEEaaaaaaaaaabxbb
1iyx_A_2951iyx   A299312KKLTDVLGDKVQLVHHHHHHHTTTSEEEaaaaaaaaaabxbx
1j9j_A_141j9j   A1730IVLAELLSEEHEVFHHHHHHHTTTSEEEaaaaaaaaaabxbb
1nvt_A_1381nvt   A141154RAVAFELAKDNNIIHHHHHHHTSSSEEEaaaaaaaaaabxbb
1o17_A_901o17   A92105TASAILLSLVNPVAHHHHHHHTTTS-EEaaaaaaaaaabwbb
1pox_A_5221pox   A526539FEQAKAIAQHEPVLHHHHHHHTTTS-EEaaaaaaaaaabwbb
1qe3_A_3641qe3   A368381VAYASAQSHYAPVWHHHHHHHTTTS-EEaaaaaaaaaabwbb
1qf9_A_951qf9   A99112NSWEENMKDFVDTKHHHHHHHTTT-EEEaaaaaaaaaabxxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dlj_A_101dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE Y - 10
1dlj_A_101dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 11
1dlj_A_101dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 12
1dlj_A_101dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 28
1exn_A_951exn   A     MSESELENOMETHIONINE F - 122
1f06_A_711f06   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 71
1i6k_A_231i6k   A     TYMTRYPTOPHANYL-5'AMP L - 23
1i6k_A_231i6k   A     TYMTRYPTOPHANYL-5'AMP F - 26
1i6k_A_231i6k   A     GOLGLYCEROL Q - 30
1i6k_A_231i6k   A     MSESELENOMETHIONINE H - 31
1i6k_A_231i6k   A     MSESELENOMETHIONINE E - 32
1i6k_A_231i6k   A     MSESELENOMETHIONINE Y - 33
1i6k_A_231i6k   A     GOLGLYCEROL Y - 33
1i6k_A_231i6k   A     MSESELENOMETHIONINE N - 34
1i6k_A_231i6k   A     GOLGLYCEROL N - 34
1i6k_A_231i6k   A     GOLGLYCEROL C - 35
1i6k_A_231i6k   A     GOLGLYCEROL Y - 36
1nvt_A_1381nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 138
1nvt_A_1381nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 139
1nvt_A_1381nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 140
1nvt_A_1381nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 156
1qf9_A_951qf9   A     C5PCYTIDINE-5'-MONOPHOSPHATE N - 97

Clusters included in this Subclass
CLUSTER: HE.3.79
CLUSTER: HE.4.45
CLUSTER: HE.5.33