Information on SUBCLASS 0.1.16 |
Subclass Accession number: 8078
Subclass: 0.1.16 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 10.4 +/- 13.3 Average RMSD (Å) : 0.417 +/- 0.147 Consensus geometry
|
Consensus Sequence: | XXXX |
(φψ)-conformation: | aabb |
Pattern: | [dks] | x | [fhry] | x | [aenr] | [gnv] | [gnr] | x | [efl] |
Conservation: | 0.192 | -0.484 | 0.337 | -0.211 | -0.641 | 0.411 | 2.280 | -0.856 | -1.028 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1auk_*_47 | 1auk | - | 50 | 58 | DQLAAGGLR | HHHHHTSEE | aaaaaabxb |
1b9l_A_57 | 1b9l | A | 65 | 73 | IQHVENNRF | HHHHHTSEE | aaaaaabbb |
1bj4_A_31 | 1bj4 | A | 41 | 49 | SNRQRVGLE | HHHHHHSEE | aaaaaaxbx |
1dfo_A_13 | 1dfo | A | 23 | 31 | KVRQEEHIE | HHHHHHSEE | aaaaaabxx |
1iuq_A_178 | 1iuq | A | 178 | 186 | KPFSIGRNL | HHHHHTSEE | aaaaaabxb |
2dpm_A_156 | 2dpm | A | 163 | 171 | SVYINNNQL | HHHHHHSEE | aaaaaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iuq_A_178 | 1iuq | A | GOLGLYCEROL | K - 178 |
1iuq_A_178 | 1iuq | A | GOLGLYCEROL | P - 179 |
1iuq_A_178 | 1iuq | A | GOLGLYCEROL | I - 182 |
1iuq_A_178 | 1iuq | A | MSESELENOMETHIONINE | I - 187 |
Clusters included in this Subclass |
CLUSTER: HE.2.75 |
CLUSTER: HE.3.170 |