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Information on SUBCLASS 0.1.19
Subclass Accession number: 8081
Subclass: 0.1.19 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 11.7 +/- 14.5
Average RMSD (Å) : 0.460 +/- 0.114

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppXp
(φψ)-conformation: aabb
Pattern: [AKL][ilmt][AKRST][ers][AL][DKRY][EHKQR][DSY][city]x[ptv]x
Conservation:0.529-0.5100.150-1.2251.615-0.1871.7180.367-1.170-0.578-0.709-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bjn_A_1011bjn   A106117AIKEAKKYCTPNHHHHHTTTSEEEaaaaaaaabbxx
1gdh_A_131gdh   A1526AMARARESYDVIHHHHHHTTSEEEaaaaaaaabxxb
1nj1_A_481nj1   A6171LRRILDRDHEE.HHHHHTTT-EE.aaaaaaaabbx.
1od2_A_17021od2   A17141725ATSRAYHDIFTIHHHHHTTTS-EEaaaaaaaabxbb
1onr_A_41onr   A415KLTSLRQYTTVVHHHHHTTTSEEEaaaaaaaabxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bjn_A_1011bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) W - 102
1od2_A_17021od2   A     MSESELENOMETHIONINE V - 1702
1od2_A_17021od2   A     MSESELENOMETHIONINE I - 1711
1od2_A_17021od2   A     MSESELENOMETHIONINE F - 1723
1od2_A_17021od2   A     MSESELENOMETHIONINE I - 1725
1od2_A_17021od2   A     MSESELENOMETHIONINE C - 1730
1od2_A_17021od2   A     MSESELENOMETHIONINE R - 1731
1od2_A_17021od2   A     ACOACETYL COENZYME *A R - 1731
1od2_A_17021od2   A     ACOACETYL COENZYME *A V - 1733
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1od2_A_17021od2   A AC2ACO BINDING SITE FOR CHAIN AR - 1731

Clusters included in this Subclass
CLUSTER: HE.3.150
CLUSTER: HE.5.194