Information on SUBCLASS 0.1.24 |
Subclass Accession number: 8086
Subclass: 0.1.24 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 4.0 +/- 8.0 Average RMSD (Å) : 0.540 +/- 0.114 Consensus geometry
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Consensus Sequence: | ppXh |
(φψ)-conformation: | aabb |
Pattern: | [dew] | x | x | x | [HRSY] | [GNRST] | [fikt] | [ACIMV] | x | x |
Conservation: | -0.284 | -1.117 | -1.117 | -0.252 | 1.193 | 1.008 | -0.763 | 1.716 | -0.594 | 0.211 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a31_A_321 | 1a31 | A | 334 | 343 | LLKEYGFCIM | HHHHHSEEEE | aaaaaabbbb |
1f0y_A_74 | 1f0y | A | 82 | 91 | EKTLSTIATS | HHHHHTEEEE | aaaaaabxbb |
1hbn_A_92 | 1hbn | A | 98 | 107 | WDDIRRTVIV | HHHHHTEEEE | aaaaaabbbb |
1kcw_*_931 | 1kcw | - | 932 | 941 | EFIESNKMHA | HHHHHTEEEE | aaaaaaxxxb |
1p3w_A_346 | 1p3w | A | 346 | 355 | DELAHSSIRF | HHHHHTEEEE | aaaaaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a31_A_321 | 1a31 | A | 5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE | K - 324 |
1a31_A_321 | 1a31 | A | 5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE | K - 328 |
1a31_A_321 | 1a31 | A | 5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE | L - 335 |
1hbn_A_92 | 1hbn | A | ZNZINC ION | R - 102 |
1kcw_*_931 | 1kcw | * | CUCOPPER (II) ION | E - 935 |
1kcw_*_931 | 1kcw | * | CUCOPPER (II) ION | K - 938 |
1kcw_*_931 | 1kcw | * | CUCOPPER (II) ION | H - 940 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1kcw_*_931 | 1kcw | * | CU5LABILE CU BINDING SITE IN DOMAIN 6. | E - 935 |
1kcw_*_931 | 1kcw | * | CU5LABILE CU BINDING SITE IN DOMAIN 6. | H - 940 |
Clusters included in this Subclass |
CLUSTER: HE.0.13 |