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Information on SUBCLASS 0.1.24
Subclass Accession number: 8086
Subclass: 0.1.24 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 4.0 +/- 8.0
Average RMSD (Å) : 0.540 +/- 0.114

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 0-45 rho (°): 135-180
Consensus Sequence: ppXh
(φψ)-conformation: aabb
Pattern: [dew]xxx[HRSY][GNRST][fikt][ACIMV]xx
Conservation:-0.284-1.117-1.117-0.2521.1931.008-0.7631.716-0.5940.211
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a31_A_3211a31   A334343LLKEYGFCIMHHHHHSEEEEaaaaaabbbb
1f0y_A_741f0y   A8291EKTLSTIATSHHHHHTEEEEaaaaaabxbb
1hbn_A_921hbn   A98107WDDIRRTVIVHHHHHTEEEEaaaaaabbbb
1kcw_*_9311kcw   -932941EFIESNKMHAHHHHHTEEEEaaaaaaxxxb
1p3w_A_3461p3w   A346355DELAHSSIRFHHHHHTEEEEaaaaaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a31_A_3211a31   A     5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE K - 324
1a31_A_3211a31   A     5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE K - 328
1a31_A_3211a31   A     5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE L - 335
1hbn_A_921hbn   A     ZNZINC ION R - 102
1kcw_*_9311kcw   *     CUCOPPER (II) ION E - 935
1kcw_*_9311kcw   *     CUCOPPER (II) ION K - 938
1kcw_*_9311kcw   *     CUCOPPER (II) ION H - 940
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1kcw_*_9311kcw   * CU5LABILE CU BINDING SITE IN DOMAIN 6.E - 935
1kcw_*_9311kcw   * CU5LABILE CU BINDING SITE IN DOMAIN 6.H - 940

Clusters included in this Subclass
CLUSTER: HE.0.13