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Information on SUBCLASS 0.1.25
Subclass Accession number: 8087
Subclass: 0.1.25 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 13.5 +/- 20.2
Average RMSD (Å) : 0.600 +/- 0.141

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pphp
(φψ)-conformation: aabb
Pattern: [NPT]x[AIL][EKLM][DEKR]xx[NQS][AEG][EHS][RSY][DES]x[AFI]x[FLY]
Conservation:0.392-0.7170.338-0.9700.432-1.737-1.0580.915-0.3351.071-0.8270.974-0.803-0.1510.3732.102
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i7p_A_2181i7p   A219234PELEELRNEHSSRFKLHHHHHHHHH-GGGEEEaaaaaaaaaaaaabbb
1lvg_A_171lvg   A1934TLLKKLFQEHSSIFGFHHHHHHHHHHTTTEEEaaaaaaaaaaaaabbx
1pox_A_381pox   A3853NSIMDALSAERDRIHYHHHHHHHHHTTTTSEEaaaaaaaaaaaaabbx
1qop_B_1661qop   B171186NEALRDWSGSYETAHYHHHHHHHHHHTTTEEEaaaaaaaaaaaaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lvg_A_171lvg   A     ADPADENOSINE-5'-DIPHOSPHATE K - 17
1lvg_A_171lvg   A     5GPGUANOSINE-5'-MONOPHOSPHATE K - 17
1lvg_A_171lvg   A     ADPADENOSINE-5'-DIPHOSPHATE S - 18
1lvg_A_171lvg   A     ADPADENOSINE-5'-DIPHOSPHATE T - 19
1lvg_A_171lvg   A     ADPADENOSINE-5'-DIPHOSPHATE L - 20

Clusters included in this Subclass
CLUSTER: HE.4.83