Information on SUBCLASS 1.2.3 |
Subclass Accession number: 81
Subclass: 1.2.3 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 11.9 +/- 15.3 Average RMSD (Å) : 0.671 +/- 0.170 Consensus geometry
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Consensus Sequence: | XpXXh |
(φψ)-conformation: | aapbb |
Pattern: | x | x | [FGKL] | [afkt] | [GKNST] | x | [ekpr] | [FVW] | x | x |
Conservation: | -0.963 | -0.873 | -0.468 | 0.063 | 1.047 | -0.733 | 0.787 | 1.832 | -0.692 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bdf_A_78 | 1bdf | A | 83 | 91 | LNLKGLAVR. | HHHHT--EE. | aaaaaxxbb. |
1gu2_A_28 | 1gu2 | A | 32 | 40 | KIFFNRKFK. | HHHHH--EE. | aaaaaxxbx. |
1kkh_A_182 | 1kkh | A | 186 | 195 | EFLKNCKFLI | HHHHT--EEE | aaaaaxbbbx |
1qb7_A_18 | 1qb7 | A | 22 | 30 | LLKKSYRWY. | HHHHH--EE. | aaaaapbbb. |
1rxx_A_200 | 1rxx | A | 200 | 209 | PEFANAEFEI | HHHHTS--EE | aaaaaxbbxb |
1so2_A_739 | 1so2 | A | 750 | 758 | WYLTTRPVP. | HHHTTS-EE. | aaaaaxpbx. |
1ucr_A_15 | 1ucr | A | 15 | 23 | KSGSKSKFY. | HHHHSS-EE. | apgaabbbb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gu2_A_28 | 1gu2 | A | HECHEME C | F - 34 |
1gu2_A_28 | 1gu2 | A | HECHEME C | F - 35 |
1gu2_A_28 | 1gu2 | A | HECHEME C | F - 39 |
1rxx_A_200 | 1rxx | A | MSESELENOMETHIONINE | F - 202 |
1so2_A_739 | 1so2 | A | MGMAGNESIUM ION | H - 741 |
1so2_A_739 | 1so2 | A | MGMAGNESIUM ION | V - 745 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gu2_A_28 | 1gu2 | A | HEAHEC BINDING SITE FOR CHAIN A | F - 34 |
Clusters included in this Subclass |
CLUSTER: HE.3.61 |