Information on SUBCLASS 0.1.43 |
Subclass Accession number: 8105
Subclass: 0.1.43 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 12.5 +/- 13.0 Average RMSD (Å) : 0.633 +/- 0.153 Consensus geometry
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Consensus Sequence: | XpXp |
(φψ)-conformation: | aabb |
Pattern: | x | x | [GNS] | [EL] | x | [FLW] | x | x | [CFL] | [L] | [RS] | x | [DQS] | [GNV] | [ER] | [NTV] |
Conservation: | -0.929 | -0.706 | 0.631 | -0.137 | -0.929 | 0.743 | -0.706 | -0.818 | 0.074 | 2.637 | 0.496 | -0.706 | 0.297 | -0.929 | 1.357 | -0.372 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dcu_A_77 | 1dcu | A | 84 | 99 | ISNEVFSNCLRSSGRT | HHHHHHHHHTTTTEEE | aaaaaaaaaaaaabbb |
1dlj_A_10 | 1dlj | A | 10 | 25 | YVGLSLGVLLSLQNEV | HHHHHHHHHHTTTSEE | aaaaaaaaaaaaabxb |
1obd_A_53 | 1obd | A | 59 | 74 | KLSEFWFKFLSNDVRN | HHHHHHHHHTTTT-EE | aaaaaaaaaaaaabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dlj_A_10 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | Y - 10 |
1dlj_A_10 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | V - 11 |
1dlj_A_10 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | G - 12 |
1dlj_A_10 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | V - 28 |
1obd_A_53 | 1obd | A | MGMAGNESIUM ION | L - 57 |
1obd_A_53 | 1obd | A | MGMAGNESIUM ION | T - 58 |
1obd_A_53 | 1obd | A | AMPADENOSINE MONOPHOSPHATE | K - 59 |
1obd_A_53 | 1obd | A | MGMAGNESIUM ION | S - 61 |
1obd_A_53 | 1obd | A | AMPADENOSINE MONOPHOSPHATE | E - 62 |
1obd_A_53 | 1obd | A | MGMAGNESIUM ION | F - 65 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1obd_A_53 | 1obd | A | AC6MG BINDING SITE FOR CHAIN A | S - 61 |
1obd_A_53 | 1obd | A | AC7AMP BINDING SITE FOR CHAIN A | E - 62 |
1obd_A_53 | 1obd | A | AC4SO4 BINDING SITE FOR CHAIN A | R - 73 |
1obd_A_53 | 1obd | A | AC4SO4 BINDING SITE FOR CHAIN A | N - 74 |
Clusters included in this Subclass |
CLUSTER: HE.5.219 |