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Information on SUBCLASS 1.2.6
Subclass Accession number: 8142
Subclass: 1.2.6 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 11.0 +/- 13.3
Average RMSD (Å) : 0.450 +/- 0.163

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXchX
(φψ)-conformation: aalbb
Pattern: xx[afgilmwy]x[adekqrst]x[DGKNRS][acfgiklv]xx
Conservation:0.213-0.4150.368-0.518-0.159-0.8382.433-0.271-0.812-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amu_A_2361amu   A242251FMALLTGASLHHHHTTT-EEaaaaaavxbb
1bud_A_261bud   A4251ESYSYLKIDIHHHHTTTEEEaaaaaavbxx
1cjw_A_1651cjw   A166175PFYQRFGFHPHHHHTTTEEEaaaaaavxbw
1csn_*_1051csn   -120128QSIHEKSLV.HHHHTTTEE.aaaaaavbb.
1db3_A_2581db3   A264273MAAAQLGIKLHHHHTTTEEEaaaaaavbxb
1fot_A_1841fot   A199207EYLHSKDII.HHHHTTTEE.aaaaaalbb.
1h8e_A_2401h8e   A255264EYFRDNGKHAHHHHTTT-EEaaaaaavbbb
1i9s_A_771i9s   A7786NDIEKEGIKYHHHHTTT-EEaaaaaavxxb
1ih7_A_3611ih7   A371379NSLKEQNKV.HHHHTTTEE.aaaaaalxb.
1j1b_A_1551j1b   A170178AYIHSFGIC.HHHHTTTEE.aaaaaavxb.
1je0_A_1671je0   A169178KKWSSRGNIAHHHHTTTEEEaaaaaavbab
1jr2_A_181jr2   A2130RELGLYGLEAHHHHTTT-EEaaaaaavxxb
1k2y_X_611k2y   X7079QGLVDCGCQVHHHHTBT-EEaaaaaagxxx
1kut_A_1461kut   A157166EFFERANFELHHHHTTTEEEaaaaaavbbx
1lc5_A_3111lc5   A313321RRLLTQRIL.HHHHTTTEE.aaaaaavbb.
1mlw_A_2381mlw   A242251LSGLAFRVFHHHHHTTTEEEaaaaaalbbx
1nhp_*_1911nhp   -199208EEMEANNITIHHHHTTTEEEaaaaaalbxb
1nyr_A_6051nyr   A605614DKEVENNQVNHHHHHTTEEEaaaaaalbbx
1onf_A_1851onf   A192201NVIKRLGIDSHHHHTTT-EEaaaaaavxxb
1qmv_A_621qmv   A6372EDFRKLGCEVHHHHTTTEEEaaaaaavbxb
1rkd_*_701rkd   -7583QQLATDNID.HHHHTTTEE.aaaaaavbx.
1ygp_A_6761ygp   A679688MKFVMNGGLIHHHHTTT-EEaaaaaavxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cjw_A_1651cjw   A     COTCOA-S-ACETYL TRYPTAMINE F - 167
1cjw_A_1651cjw   A     COTCOA-S-ACETYL TRYPTAMINE Y - 168
1cjw_A_1651cjw   A     COTCOA-S-ACETYL TRYPTAMINE R - 170
1cjw_A_1651cjw   A     COTCOA-S-ACETYL TRYPTAMINE F - 171
1h8e_A_2401h8e   A     GOLGLYCEROL Y - 244
1h8e_A_2401h8e   A     GOLGLYCEROL L - 245
1h8e_A_2401h8e   A     GOLGLYCEROL Y - 248
1h8e_A_2401h8e   A     ADPADENOSINE-5'-DIPHOSPHATE D - 269
1h8e_A_2401h8e   A     MGMAGNESIUM ION D - 269
1i9s_A_771i9s   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED D - 78
1i9s_A_771i9s   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED K - 81
1ih7_A_3611ih7   A     GMPGUANOSINE F - 370
1ih7_A_3611ih7   A     GMPGUANOSINE L - 373
1ih7_A_3611ih7   A     GMPGUANOSINE K - 374
1ih7_A_3611ih7   A     GMPGUANOSINE E - 375
1ih7_A_3611ih7   A     GMPGUANOSINE Q - 376
1ih7_A_3611ih7   A     GMPGUANOSINE N - 377
1ih7_A_3611ih7   A     GMPGUANOSINE K - 378
1ih7_A_3611ih7   A     GMPGUANOSINE V - 379
1je0_A_1671je0   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL V - 179
1je0_A_1671je0   A     PO4PHOSPHATE ION E - 180
1je0_A_1671je0   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL E - 180
1kut_A_1461kut   A     MSESELENOMETHIONINE E - 146
1kut_A_1461kut   A     MSESELENOMETHIONINE A - 147
1kut_A_1461kut   A     MSESELENOMETHIONINE A - 148
1kut_A_1461kut   A     MSESELENOMETHIONINE V - 149
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN P - 238
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN R - 239
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN F - 241
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN L - 242
1mlw_A_2381mlw   A     FEFE (III) ION F - 250
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN F - 250
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN H - 251
1mlw_A_2381mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN C - 252
1onf_A_1851onf   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 185
1onf_A_1851onf   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 186
1onf_A_1851onf   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 189
1onf_A_1851onf   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 190

Clusters included in this Subclass
CLUSTER: HE.2.118
CLUSTER: HE.3.95
CLUSTER: HE.4.23