Information on SUBCLASS 1.2.13 |
Subclass Accession number: 8149
Subclass: 1.2.13 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 10.6 +/- 13.7 Average RMSD (Å) : 0.671 +/- 0.111 Consensus geometry
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Consensus Sequence: | XXchp |
(φψ)-conformation: | aalpb |
Pattern: | [aekl] | [AEFKL] | [AEKRST] | x | x | [GNS] | [ailvw] | [qrsy] | [ilptv] |
Conservation: | -0.395 | -0.476 | 0.359 | -0.631 | -0.542 | 2.545 | -0.376 | -0.063 | -0.420 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1af7_*_157 | 1af7 | - | 161 | 169 | EKARSGIYR | HHHHHTEEE | aaaaavxbx |
1bcp_A_118 | 1bcp | A | 123 | 131 | LATYQSEYL | HHHHHTEEE | aaaaalxbx |
1fui_A_65 | 1fui | A | 74 | 82 | KFSSQNVGL | HHHTTTEEE | aaaaalxab |
1kol_A_358 | 1kol | A | 358 | 366 | IAEVVGVQV | HHHHHTEEE | aaaaavpbx |
1mq7_A_67 | 1mq7 | A | 67 | 75 | LATRVGLSI | HHHHTTEEE | aaaaavxbb |
1sur_*_136 | 1sur | - | 142 | 150 | ALKELNAQT | HHHHTTEEE | aaaaalxab |
2bbk_H_257 | 2bbk | H | 258 | 266 | AERADGWRP | HHHHTTEEE | aaaaavxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1af7_*_157 | 1af7 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 159 |
1mq7_A_67 | 1mq7 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | S - 74 |
1mq7_A_67 | 1mq7 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | I - 75 |
Clusters included in this Subclass |
CLUSTER: HE.1.48 |
CLUSTER: HE.2.95 |
CLUSTER: HE.3.128 |